Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm13238-201ENSMUST00000117655 780 ntBASIC15.75■□□□□ 0.11
SgcaP82350 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SgcaP82350 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.75■□□□□ 0.11
SgcaP82350 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcaP82350 Gm10232-201ENSMUST00000089221 720 ntBASIC15.75■□□□□ 0.11
SgcaP82350 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SgcaP82350 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcaP82350 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.75■□□□□ 0.11
SgcaP82350 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.75■□□□□ 0.11
SgcaP82350 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcaP82350 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcaP82350 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcaP82350 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SgcaP82350 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SgcaP82350 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.74■□□□□ 0.11
SgcaP82350 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.74■□□□□ 0.11
SgcaP82350 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcaP82350 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SgcaP82350 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.73■□□□□ 0.11
SgcaP82350 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.73■□□□□ 0.11
SgcaP82350 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcaP82350 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Gm43566-201ENSMUST00000196851 808 ntBASIC15.72■□□□□ 0.11
SgcaP82350 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.72■□□□□ 0.11
SgcaP82350 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcaP82350 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.71■□□□□ 0.11
SgcaP82350 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcaP82350 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SgcaP82350 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SgcaP82350 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.71■□□□□ 0.11
SgcaP82350 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcaP82350 Gm5921-201ENSMUST00000075898 882 ntBASIC15.71■□□□□ 0.11
SgcaP82350 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcaP82350 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcaP82350 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcaP82350 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SgcaP82350 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SgcaP82350 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SgcaP82350 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
SgcaP82350 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SgcaP82350 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SgcaP82350 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcaP82350 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SgcaP82350 Etf1-202ENSMUST00000180351 108 ntBASIC15.7■□□□□ 0.1
SgcaP82350 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.7■□□□□ 0.1
SgcaP82350 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcaP82350 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcaP82350 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
SgcaP82350 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcaP82350 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.7■□□□□ 0.1
SgcaP82350 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcaP82350 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms