Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
SgcgP82348 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcgP82348 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SgcgP82348 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SgcgP82348 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcgP82348 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
SgcgP82348 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SgcgP82348 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcgP82348 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.57■□□□□ 0.56
SgcgP82348 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcgP82348 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SgcgP82348 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcgP82348 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcgP82348 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcgP82348 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SgcgP82348 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcgP82348 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SgcgP82348 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.56■□□□□ 0.56
SgcgP82348 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SgcgP82348 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.56■□□□□ 0.56
SgcgP82348 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcgP82348 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SgcgP82348 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SgcgP82348 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SgcgP82348 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcgP82348 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.55■□□□□ 0.56
SgcgP82348 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SgcgP82348 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
SgcgP82348 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.55■□□□□ 0.56
SgcgP82348 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.55■□□□□ 0.56
SgcgP82348 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.55■□□□□ 0.56
SgcgP82348 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.55■□□□□ 0.56
SgcgP82348 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcgP82348 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.54■□□□□ 0.56
SgcgP82348 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcgP82348 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
SgcgP82348 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcgP82348 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcgP82348 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcgP82348 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcgP82348 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcgP82348 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SgcgP82348 Gm10653-202ENSMUST00000139570 835 ntBASIC18.54■□□□□ 0.56
SgcgP82348 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcgP82348 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SgcgP82348 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SgcgP82348 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcgP82348 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SgcgP82348 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcgP82348 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcgP82348 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SgcgP82348 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.53■□□□□ 0.56
SgcgP82348 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SgcgP82348 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SgcgP82348 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcgP82348 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcgP82348 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SgcgP82348 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcgP82348 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcgP82348 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcgP82348 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SgcgP82348 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SgcgP82348 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcgP82348 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcgP82348 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SgcgP82348 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcgP82348 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcgP82348 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.52■□□□□ 0.56
SgcgP82348 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SgcgP82348 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcgP82348 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SgcgP82348 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcgP82348 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.51■□□□□ 0.55
SgcgP82348 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SgcgP82348 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcgP82348 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
SgcgP82348 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcgP82348 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcgP82348 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcgP82348 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcgP82348 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcgP82348 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.5■□□□□ 0.55
SgcgP82348 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SgcgP82348 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.5■□□□□ 0.55
SgcgP82348 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcgP82348 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcgP82348 Gm12527-201ENSMUST00000117967 564 ntBASIC18.5■□□□□ 0.55
SgcgP82348 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms