Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six5P70178 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Six5P70178 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Six5P70178 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Six5P70178 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six5P70178 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Six5P70178 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six5P70178 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six5P70178 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six5P70178 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six5P70178 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six5P70178 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Six5P70178 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six5P70178 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six5P70178 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six5P70178 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Six5P70178 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six5P70178 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.58■□□□□ 0.41
Six5P70178 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six5P70178 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six5P70178 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Six5P70178 Gm15039-201ENSMUST00000118914 875 ntBASIC17.58■□□□□ 0.4
Six5P70178 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Six5P70178 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six5P70178 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six5P70178 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six5P70178 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six5P70178 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Six5P70178 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Six5P70178 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.58■□□□□ 0.4
Six5P70178 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six5P70178 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six5P70178 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six5P70178 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six5P70178 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six5P70178 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six5P70178 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six5P70178 Gm13534-201ENSMUST00000121169 513 ntBASIC17.57■□□□□ 0.4
Six5P70178 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six5P70178 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.57■□□□□ 0.4
Six5P70178 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six5P70178 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six5P70178 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Six5P70178 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six5P70178 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six5P70178 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six5P70178 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six5P70178 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.56■□□□□ 0.4
Six5P70178 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six5P70178 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six5P70178 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Six5P70178 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six5P70178 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Six5P70178 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Six5P70178 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six5P70178 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six5P70178 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six5P70178 Gm10033-202ENSMUST00000211874 928 ntBASIC17.56■□□□□ 0.4
Six5P70178 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six5P70178 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six5P70178 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Six5P70178 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Six5P70178 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.55■□□□□ 0.4
Six5P70178 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.55■□□□□ 0.4
Six5P70178 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.55■□□□□ 0.4
Six5P70178 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.55■□□□□ 0.4
Six5P70178 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six5P70178 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Six5P70178 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six5P70178 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six5P70178 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six5P70178 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six5P70178 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.54■□□□□ 0.4
Six5P70178 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six5P70178 Gm8495-201ENSMUST00000188740 694 ntBASIC17.54■□□□□ 0.4
Six5P70178 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six5P70178 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.54■□□□□ 0.4
Six5P70178 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
Six5P70178 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six5P70178 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six5P70178 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six5P70178 Gm42642-201ENSMUST00000200683 355 ntBASIC17.53■□□□□ 0.4
Six5P70178 Gm18671-201ENSMUST00000214826 683 ntBASIC17.53■□□□□ 0.4
Six5P70178 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Six5P70178 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six5P70178 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Six5P70178 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Six5P70178 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six5P70178 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms