Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.2■□□□□ 0.66
Tubgcp3P58854 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubgcp3P58854 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubgcp3P58854 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.19■□□□□ 0.66
Tubgcp3P58854 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tubgcp3P58854 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubgcp3P58854 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tubgcp3P58854 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.19■□□□□ 0.66
Tubgcp3P58854 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tubgcp3P58854 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tubgcp3P58854 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tubgcp3P58854 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.19■□□□□ 0.66
Tubgcp3P58854 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubgcp3P58854 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tubgcp3P58854 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubgcp3P58854 BC021767-201ENSMUST00000126387 1716 ntBASIC19.19■□□□□ 0.66
Tubgcp3P58854 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubgcp3P58854 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Tubgcp3P58854 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tubgcp3P58854 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tubgcp3P58854 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.18■□□□□ 0.66
Tubgcp3P58854 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.18■□□□□ 0.66
Tubgcp3P58854 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Tubgcp3P58854 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tubgcp3P58854 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tubgcp3P58854 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.18■□□□□ 0.66
Tubgcp3P58854 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tubgcp3P58854 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tubgcp3P58854 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tubgcp3P58854 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.17■□□□□ 0.66
Tubgcp3P58854 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tubgcp3P58854 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tubgcp3P58854 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubgcp3P58854 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubgcp3P58854 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubgcp3P58854 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.15■□□□□ 0.66
Tubgcp3P58854 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.15■□□□□ 0.66
Tubgcp3P58854 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubgcp3P58854 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubgcp3P58854 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubgcp3P58854 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubgcp3P58854 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubgcp3P58854 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tubgcp3P58854 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Tubgcp3P58854 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubgcp3P58854 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tubgcp3P58854 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tubgcp3P58854 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tubgcp3P58854 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubgcp3P58854 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tubgcp3P58854 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubgcp3P58854 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubgcp3P58854 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubgcp3P58854 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tubgcp3P58854 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.14■□□□□ 0.65
Tubgcp3P58854 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Tubgcp3P58854 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tubgcp3P58854 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms