Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tpm1P58771 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tpm1P58771 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tpm1P58771 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tpm1P58771 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Tpm1P58771 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tpm1P58771 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Tpm1P58771 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tpm1P58771 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tpm1P58771 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tpm1P58771 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Tpm1P58771 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tpm1P58771 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.98■□□□□ 0.95
Tpm1P58771 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tpm1P58771 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tpm1P58771 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tpm1P58771 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tpm1P58771 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.98■□□□□ 0.95
Tpm1P58771 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Tpm1P58771 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tpm1P58771 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Tpm1P58771 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tpm1P58771 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.97■□□□□ 0.95
Tpm1P58771 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm1P58771 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm1P58771 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tpm1P58771 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tpm1P58771 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm1P58771 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm1P58771 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Tpm1P58771 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Tpm1P58771 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm1P58771 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm1P58771 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.97■□□□□ 0.95
Tpm1P58771 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm1P58771 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tpm1P58771 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.96■□□□□ 0.95
Tpm1P58771 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.96■□□□□ 0.95
Tpm1P58771 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Tpm1P58771 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Tpm1P58771 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Tpm1P58771 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tpm1P58771 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.95■□□□□ 0.94
Tpm1P58771 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm1P58771 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm1P58771 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm1P58771 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tpm1P58771 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm1P58771 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm1P58771 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm1P58771 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Tpm1P58771 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm1P58771 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm1P58771 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.94■□□□□ 0.94
Tpm1P58771 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm1P58771 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.94■□□□□ 0.94
Tpm1P58771 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.94■□□□□ 0.94
Tpm1P58771 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm1P58771 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm1P58771 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tpm1P58771 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm1P58771 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Tpm1P58771 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Tpm1P58771 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.93■□□□□ 0.94
Tpm1P58771 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.93■□□□□ 0.94
Tpm1P58771 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm1P58771 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm1P58771 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm1P58771 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm1P58771 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tpm1P58771 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm1P58771 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.92■□□□□ 0.94
Tpm1P58771 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm1P58771 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Tpm1P58771 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm1P58771 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm1P58771 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tpm1P58771 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.92■□□□□ 0.94
Tpm1P58771 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Tpm1P58771 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Tpm1P58771 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms