Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Lim2P56563 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lim2P56563 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lim2P56563 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lim2P56563 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lim2P56563 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Lim2P56563 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.84■□□□□ 0.61
Lim2P56563 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lim2P56563 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lim2P56563 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lim2P56563 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lim2P56563 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lim2P56563 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lim2P56563 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lim2P56563 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lim2P56563 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lim2P56563 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lim2P56563 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Lim2P56563 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.83■□□□□ 0.6
Lim2P56563 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.83■□□□□ 0.6
Lim2P56563 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.83■□□□□ 0.6
Lim2P56563 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lim2P56563 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lim2P56563 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lim2P56563 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lim2P56563 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lim2P56563 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lim2P56563 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lim2P56563 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lim2P56563 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lim2P56563 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.82■□□□□ 0.6
Lim2P56563 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lim2P56563 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lim2P56563 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lim2P56563 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lim2P56563 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lim2P56563 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lim2P56563 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lim2P56563 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Lim2P56563 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lim2P56563 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.81■□□□□ 0.6
Lim2P56563 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lim2P56563 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lim2P56563 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lim2P56563 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lim2P56563 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lim2P56563 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lim2P56563 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lim2P56563 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lim2P56563 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lim2P56563 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.8■□□□□ 0.6
Lim2P56563 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Lim2P56563 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Lim2P56563 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lim2P56563 Gm7514-201ENSMUST00000209475 934 ntBASIC18.8■□□□□ 0.6
Lim2P56563 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lim2P56563 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lim2P56563 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lim2P56563 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lim2P56563 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lim2P56563 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lim2P56563 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.79■□□□□ 0.6
Lim2P56563 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lim2P56563 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lim2P56563 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lim2P56563 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lim2P56563 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Lim2P56563 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lim2P56563 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lim2P56563 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lim2P56563 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.79■□□□□ 0.6
Lim2P56563 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.79■□□□□ 0.6
Lim2P56563 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lim2P56563 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Lim2P56563 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lim2P56563 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lim2P56563 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lim2P56563 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lim2P56563 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lim2P56563 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lim2P56563 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.78■□□□□ 0.6
Lim2P56563 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.78■□□□□ 0.6
Lim2P56563 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lim2P56563 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lim2P56563 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lim2P56563 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lim2P56563 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.77■□□□□ 0.6
Lim2P56563 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lim2P56563 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lim2P56563 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Lim2P56563 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lim2P56563 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Lim2P56563 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lim2P56563 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.77■□□□□ 0.6
Lim2P56563 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.77■□□□□ 0.6
Lim2P56563 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Lim2P56563 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lim2P56563 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lim2P56563 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lim2P56563 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms