Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.08■□□□□ 0.81
NcanP55066 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.08■□□□□ 0.81
NcanP55066 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NcanP55066 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.08■□□□□ 0.8
NcanP55066 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NcanP55066 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NcanP55066 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NcanP55066 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NcanP55066 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NcanP55066 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NcanP55066 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.07■□□□□ 0.8
NcanP55066 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NcanP55066 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
NcanP55066 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NcanP55066 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NcanP55066 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.06■□□□□ 0.8
NcanP55066 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NcanP55066 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NcanP55066 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.06■□□□□ 0.8
NcanP55066 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NcanP55066 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NcanP55066 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NcanP55066 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NcanP55066 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NcanP55066 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.05■□□□□ 0.8
NcanP55066 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NcanP55066 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.04■□□□□ 0.8
NcanP55066 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NcanP55066 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NcanP55066 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NcanP55066 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.04■□□□□ 0.8
NcanP55066 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NcanP55066 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NcanP55066 Gm43183-201ENSMUST00000200632 547 ntBASIC20.04■□□□□ 0.8
NcanP55066 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.04■□□□□ 0.8
NcanP55066 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NcanP55066 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NcanP55066 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NcanP55066 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NcanP55066 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NcanP55066 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NcanP55066 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NcanP55066 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.03■□□□□ 0.8
NcanP55066 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NcanP55066 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NcanP55066 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NcanP55066 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NcanP55066 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.03■□□□□ 0.8
NcanP55066 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NcanP55066 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NcanP55066 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.03■□□□□ 0.8
NcanP55066 Mtag2-201ENSMUST00000058665 714 ntBASIC20.03■□□□□ 0.8
NcanP55066 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NcanP55066 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NcanP55066 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NcanP55066 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NcanP55066 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NcanP55066 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NcanP55066 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NcanP55066 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NcanP55066 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NcanP55066 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NcanP55066 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NcanP55066 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NcanP55066 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NcanP55066 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NcanP55066 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NcanP55066 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NcanP55066 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NcanP55066 Gm33142-201ENSMUST00000193913 867 ntBASIC20.01■□□□□ 0.79
NcanP55066 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NcanP55066 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.01■□□□□ 0.79
NcanP55066 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NcanP55066 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NcanP55066 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NcanP55066 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NcanP55066 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NcanP55066 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NcanP55066 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NcanP55066 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NcanP55066 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NcanP55066 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20■□□□□ 0.79
NcanP55066 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20■□□□□ 0.79
NcanP55066 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NcanP55066 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20■□□□□ 0.79
NcanP55066 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NcanP55066 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NcanP55066 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NcanP55066 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NcanP55066 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NcanP55066 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NcanP55066 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NcanP55066 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.99■□□□□ 0.79
NcanP55066 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NcanP55066 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
NcanP55066 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NcanP55066 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NcanP55066 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.99■□□□□ 0.79
NcanP55066 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NcanP55066 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms