Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx6P54823 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx6P54823 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx6P54823 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.2■□□□□ 0.66
Ddx6P54823 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx6P54823 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.19■□□□□ 0.66
Ddx6P54823 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.19■□□□□ 0.66
Ddx6P54823 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx6P54823 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx6P54823 Dio3-201ENSMUST00000097228 1449 ntBASIC19.18■□□□□ 0.66
Ddx6P54823 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ddx6P54823 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx6P54823 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx6P54823 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx6P54823 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.18■□□□□ 0.66
Ddx6P54823 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.18■□□□□ 0.66
Ddx6P54823 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ddx6P54823 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx6P54823 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ddx6P54823 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx6P54823 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx6P54823 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx6P54823 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ddx6P54823 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx6P54823 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.17■□□□□ 0.66
Ddx6P54823 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ddx6P54823 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.17■□□□□ 0.66
Ddx6P54823 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx6P54823 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.17■□□□□ 0.66
Ddx6P54823 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx6P54823 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx6P54823 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx6P54823 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx6P54823 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx6P54823 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.16■□□□□ 0.66
Ddx6P54823 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.16■□□□□ 0.66
Ddx6P54823 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx6P54823 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Ddx6P54823 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx6P54823 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx6P54823 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx6P54823 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx6P54823 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ddx6P54823 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx6P54823 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.15■□□□□ 0.66
Ddx6P54823 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.15■□□□□ 0.66
Ddx6P54823 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx6P54823 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx6P54823 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx6P54823 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx6P54823 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx6P54823 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Ddx6P54823 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx6P54823 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx6P54823 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx6P54823 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ddx6P54823 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx6P54823 Gm5643-201ENSMUST00000117081 966 ntBASIC19.14■□□□□ 0.65
Ddx6P54823 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx6P54823 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx6P54823 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.14■□□□□ 0.65
Ddx6P54823 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx6P54823 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx6P54823 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx6P54823 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx6P54823 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx6P54823 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Ddx6P54823 Gm10252-201ENSMUST00000209541 832 ntBASIC19.13■□□□□ 0.65
Ddx6P54823 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.13■□□□□ 0.65
Ddx6P54823 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.13■□□□□ 0.65
Ddx6P54823 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx6P54823 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx6P54823 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx6P54823 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx6P54823 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx6P54823 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.12■□□□□ 0.65
Ddx6P54823 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx6P54823 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms