Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Lhx4P53776 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lhx4P53776 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lhx4P53776 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lhx4P53776 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lhx4P53776 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lhx4P53776 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.86■□□□□ 0.13
Lhx4P53776 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.86■□□□□ 0.13
Lhx4P53776 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Lhx4P53776 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.86■□□□□ 0.13
Lhx4P53776 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lhx4P53776 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.86■□□□□ 0.13
Lhx4P53776 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.85■□□□□ 0.13
Lhx4P53776 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Lhx4P53776 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx4P53776 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.85■□□□□ 0.13
Lhx4P53776 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.85■□□□□ 0.13
Lhx4P53776 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
Lhx4P53776 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx4P53776 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx4P53776 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.85■□□□□ 0.13
Lhx4P53776 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx4P53776 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Lhx4P53776 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx4P53776 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.85■□□□□ 0.13
Lhx4P53776 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx4P53776 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx4P53776 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lhx4P53776 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Lhx4P53776 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx4P53776 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx4P53776 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx4P53776 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Lhx4P53776 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Lhx4P53776 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx4P53776 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx4P53776 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Lhx4P53776 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lhx4P53776 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lhx4P53776 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lhx4P53776 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.83■□□□□ 0.12
Lhx4P53776 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.83■□□□□ 0.12
Lhx4P53776 Gm42642-201ENSMUST00000200683 355 ntBASIC15.83■□□□□ 0.12
Lhx4P53776 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.83■□□□□ 0.12
Lhx4P53776 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Gm9988-201ENSMUST00000069786 435 ntBASIC15.83■□□□□ 0.12
Lhx4P53776 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Lhx4P53776 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Lhx4P53776 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx4P53776 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Lhx4P53776 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Gm42778-201ENSMUST00000199644 553 ntBASIC15.82■□□□□ 0.12
Lhx4P53776 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.82■□□□□ 0.12
Lhx4P53776 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Lhx4P53776 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx4P53776 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx4P53776 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx4P53776 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx4P53776 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx4P53776 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
Lhx4P53776 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx4P53776 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx4P53776 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx4P53776 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx4P53776 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx4P53776 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx4P53776 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms