Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SftpbP50405 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.22■□□□□ 0.67
SftpbP50405 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.22■□□□□ 0.67
SftpbP50405 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SftpbP50405 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SftpbP50405 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SftpbP50405 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SftpbP50405 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SftpbP50405 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SftpbP50405 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SftpbP50405 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SftpbP50405 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SftpbP50405 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SftpbP50405 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SftpbP50405 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SftpbP50405 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.21■□□□□ 0.67
SftpbP50405 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
SftpbP50405 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SftpbP50405 Gm21956-201ENSMUST00000179946 522 ntBASIC19.21■□□□□ 0.67
SftpbP50405 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SftpbP50405 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.21■□□□□ 0.67
SftpbP50405 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SftpbP50405 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SftpbP50405 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SftpbP50405 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SftpbP50405 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SftpbP50405 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.66
SftpbP50405 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SftpbP50405 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SftpbP50405 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SftpbP50405 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SftpbP50405 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.2■□□□□ 0.66
SftpbP50405 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SftpbP50405 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SftpbP50405 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SftpbP50405 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SftpbP50405 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SftpbP50405 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.2■□□□□ 0.66
SftpbP50405 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SftpbP50405 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SftpbP50405 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
SftpbP50405 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SftpbP50405 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SftpbP50405 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.19■□□□□ 0.66
SftpbP50405 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SftpbP50405 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SftpbP50405 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SftpbP50405 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SftpbP50405 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SftpbP50405 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SftpbP50405 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SftpbP50405 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.19■□□□□ 0.66
SftpbP50405 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SftpbP50405 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SftpbP50405 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SftpbP50405 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.18■□□□□ 0.66
SftpbP50405 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SftpbP50405 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.18■□□□□ 0.66
SftpbP50405 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SftpbP50405 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SftpbP50405 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.17■□□□□ 0.66
SftpbP50405 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SftpbP50405 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SftpbP50405 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SftpbP50405 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.16■□□□□ 0.66
SftpbP50405 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SftpbP50405 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SftpbP50405 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SftpbP50405 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.16■□□□□ 0.66
SftpbP50405 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SftpbP50405 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms