Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TgfaP48030 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TgfaP48030 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TgfaP48030 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
TgfaP48030 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TgfaP48030 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.36■□□□□ 0.21
TgfaP48030 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TgfaP48030 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TgfaP48030 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TgfaP48030 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.36■□□□□ 0.21
TgfaP48030 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TgfaP48030 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TgfaP48030 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.35■□□□□ 0.21
TgfaP48030 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TgfaP48030 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TgfaP48030 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.35■□□□□ 0.21
TgfaP48030 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TgfaP48030 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.35■□□□□ 0.21
TgfaP48030 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TgfaP48030 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TgfaP48030 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TgfaP48030 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TgfaP48030 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TgfaP48030 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TgfaP48030 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.34■□□□□ 0.21
TgfaP48030 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TgfaP48030 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TgfaP48030 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.34■□□□□ 0.21
TgfaP48030 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.34■□□□□ 0.21
TgfaP48030 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TgfaP48030 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.34■□□□□ 0.21
TgfaP48030 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TgfaP48030 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TgfaP48030 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TgfaP48030 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TgfaP48030 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TgfaP48030 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TgfaP48030 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TgfaP48030 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TgfaP48030 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TgfaP48030 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TgfaP48030 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TgfaP48030 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TgfaP48030 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TgfaP48030 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TgfaP48030 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TgfaP48030 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TgfaP48030 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TgfaP48030 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TgfaP48030 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.33■□□□□ 0.2
TgfaP48030 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TgfaP48030 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.32■□□□□ 0.2
TgfaP48030 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.32■□□□□ 0.2
TgfaP48030 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TgfaP48030 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TgfaP48030 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.32■□□□□ 0.2
TgfaP48030 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.32■□□□□ 0.2
TgfaP48030 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.32■□□□□ 0.2
TgfaP48030 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TgfaP48030 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TgfaP48030 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TgfaP48030 Gm9987-201ENSMUST00000069768 567 ntBASIC16.32■□□□□ 0.2
TgfaP48030 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TgfaP48030 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TgfaP48030 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TgfaP48030 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TgfaP48030 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TgfaP48030 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TgfaP48030 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TgfaP48030 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.31■□□□□ 0.2
TgfaP48030 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TgfaP48030 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TgfaP48030 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TgfaP48030 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TgfaP48030 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TgfaP48030 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TgfaP48030 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.3■□□□□ 0.2
TgfaP48030 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TgfaP48030 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.3■□□□□ 0.2
TgfaP48030 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.3■□□□□ 0.2
TgfaP48030 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.3■□□□□ 0.2
TgfaP48030 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TgfaP48030 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TgfaP48030 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.3■□□□□ 0.2
TgfaP48030 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TgfaP48030 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.3■□□□□ 0.2
TgfaP48030 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms