Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rab3c-203ENSMUST00000224180 967 ntBASIC17.81■□□□□ 0.44
Nkx2-6P43688 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-6P43688 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-6P43688 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-6P43688 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-6P43688 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.8■□□□□ 0.44
Nkx2-6P43688 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-6P43688 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Nkx2-6P43688 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-6P43688 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-6P43688 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-6P43688 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-6P43688 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-6P43688 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.79■□□□□ 0.44
Nkx2-6P43688 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.79■□□□□ 0.44
Nkx2-6P43688 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-6P43688 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.78■□□□□ 0.44
Nkx2-6P43688 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
Nkx2-6P43688 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-6P43688 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-6P43688 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-6P43688 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.78■□□□□ 0.44
Nkx2-6P43688 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-6P43688 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.77■□□□□ 0.44
Nkx2-6P43688 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-6P43688 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-6P43688 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-6P43688 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-6P43688 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-6P43688 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-6P43688 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.77■□□□□ 0.44
Nkx2-6P43688 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-6P43688 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-6P43688 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-6P43688 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-6P43688 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.77■□□□□ 0.43
Nkx2-6P43688 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-6P43688 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Nkx2-6P43688 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.77■□□□□ 0.43
Nkx2-6P43688 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.77■□□□□ 0.43
Nkx2-6P43688 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.76■□□□□ 0.43
Nkx2-6P43688 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Nkx2-6P43688 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-6P43688 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nkx2-6P43688 Gm37856-201ENSMUST00000191634 999 ntBASIC17.76■□□□□ 0.43
Nkx2-6P43688 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.76■□□□□ 0.43
Nkx2-6P43688 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.76■□□□□ 0.43
Nkx2-6P43688 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-6P43688 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-6P43688 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-6P43688 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-6P43688 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-6P43688 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-6P43688 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-6P43688 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-6P43688 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-6P43688 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nkx2-6P43688 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-6P43688 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-6P43688 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-6P43688 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-6P43688 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-6P43688 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-6P43688 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.74■□□□□ 0.43
Nkx2-6P43688 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-6P43688 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-6P43688 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-6P43688 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Nkx2-6P43688 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.73■□□□□ 0.43
Nkx2-6P43688 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.73■□□□□ 0.43
Nkx2-6P43688 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-6P43688 Gm13168-201ENSMUST00000121771 632 ntBASIC17.73■□□□□ 0.43
Nkx2-6P43688 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms