Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm21362-201ENSMUST00000194272 928 ntBASIC18.04■□□□□ 0.48
Sox18P43680 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox18P43680 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox18P43680 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox18P43680 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox18P43680 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox18P43680 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox18P43680 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.03■□□□□ 0.48
Sox18P43680 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox18P43680 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sox18P43680 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox18P43680 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox18P43680 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox18P43680 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sox18P43680 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox18P43680 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.02■□□□□ 0.48
Sox18P43680 Gm43799-201ENSMUST00000201845 579 ntBASIC18.02■□□□□ 0.48
Sox18P43680 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sox18P43680 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox18P43680 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox18P43680 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox18P43680 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox18P43680 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox18P43680 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox18P43680 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox18P43680 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox18P43680 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox18P43680 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox18P43680 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.01■□□□□ 0.47
Sox18P43680 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.01■□□□□ 0.47
Sox18P43680 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.01■□□□□ 0.47
Sox18P43680 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox18P43680 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.01■□□□□ 0.47
Sox18P43680 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sox18P43680 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox18P43680 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sox18P43680 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18■□□□□ 0.47
Sox18P43680 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18■□□□□ 0.47
Sox18P43680 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sox18P43680 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox18P43680 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Sox18P43680 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox18P43680 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sox18P43680 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox18P43680 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Sox18P43680 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox18P43680 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.99■□□□□ 0.47
Sox18P43680 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox18P43680 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.99■□□□□ 0.47
Sox18P43680 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox18P43680 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.99■□□□□ 0.47
Sox18P43680 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox18P43680 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox18P43680 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox18P43680 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Sox18P43680 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox18P43680 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.98■□□□□ 0.47
Sox18P43680 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.98■□□□□ 0.47
Sox18P43680 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox18P43680 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox18P43680 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.98■□□□□ 0.47
Sox18P43680 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox18P43680 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox18P43680 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sox18P43680 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox18P43680 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox18P43680 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox18P43680 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox18P43680 Gm7860-201ENSMUST00000121190 879 ntBASIC17.97■□□□□ 0.47
Sox18P43680 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.97■□□□□ 0.47
Sox18P43680 Mir5122-201ENSMUST00000175004 89 ntBASIC17.97■□□□□ 0.47
Sox18P43680 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.97■□□□□ 0.47
Sox18P43680 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.97■□□□□ 0.47
Sox18P43680 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.97■□□□□ 0.47
Sox18P43680 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox18P43680 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox18P43680 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms