Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Hist1h1aP43275 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1aP43275 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1aP43275 BC021767-201ENSMUST00000126387 1716 ntBASIC15.48■□□□□ 0.07
Hist1h1aP43275 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.48■□□□□ 0.07
Hist1h1aP43275 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Gm12922-201ENSMUST00000120626 809 ntBASIC15.48■□□□□ 0.07
Hist1h1aP43275 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1aP43275 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.47■□□□□ 0.07
Hist1h1aP43275 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.47■□□□□ 0.07
Hist1h1aP43275 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist1h1aP43275 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.47■□□□□ 0.07
Hist1h1aP43275 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Hist1h1aP43275 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.46■□□□□ 0.07
Hist1h1aP43275 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Hist1h1aP43275 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.46■□□□□ 0.07
Hist1h1aP43275 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.46■□□□□ 0.07
Hist1h1aP43275 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hist1h1aP43275 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.46■□□□□ 0.06
Hist1h1aP43275 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist1h1aP43275 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hist1h1aP43275 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist1h1aP43275 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist1h1aP43275 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.44■□□□□ 0.06
Hist1h1aP43275 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist1h1aP43275 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist1h1aP43275 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hist1h1aP43275 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Hist1h1aP43275 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.44■□□□□ 0.06
Hist1h1aP43275 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist1h1aP43275 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Hist1h1aP43275 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist1h1aP43275 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist1h1aP43275 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist1h1aP43275 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist1h1aP43275 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms