Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Sox6P40645 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox6P40645 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox6P40645 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.61■□□□□ 0.41
Sox6P40645 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.61■□□□□ 0.41
Sox6P40645 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.61■□□□□ 0.41
Sox6P40645 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox6P40645 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.61■□□□□ 0.41
Sox6P40645 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.61■□□□□ 0.41
Sox6P40645 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox6P40645 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.61■□□□□ 0.41
Sox6P40645 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox6P40645 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox6P40645 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sox6P40645 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.61■□□□□ 0.41
Sox6P40645 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.6■□□□□ 0.41
Sox6P40645 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sox6P40645 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox6P40645 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox6P40645 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox6P40645 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox6P40645 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox6P40645 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sox6P40645 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox6P40645 Gm12251-201ENSMUST00000117893 792 ntBASIC17.59■□□□□ 0.41
Sox6P40645 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox6P40645 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sox6P40645 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox6P40645 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox6P40645 Rarb-207ENSMUST00000225921 2756 ntBASIC17.59■□□□□ 0.41
Sox6P40645 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox6P40645 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox6P40645 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox6P40645 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox6P40645 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sox6P40645 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sox6P40645 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox6P40645 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.58■□□□□ 0.41
Sox6P40645 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox6P40645 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox6P40645 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox6P40645 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox6P40645 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.58■□□□□ 0.4
Sox6P40645 Gm6139-201ENSMUST00000079261 882 ntBASIC17.58■□□□□ 0.4
Sox6P40645 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox6P40645 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox6P40645 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox6P40645 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox6P40645 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox6P40645 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox6P40645 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox6P40645 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox6P40645 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox6P40645 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox6P40645 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sox6P40645 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox6P40645 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox6P40645 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox6P40645 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sox6P40645 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox6P40645 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox6P40645 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox6P40645 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sox6P40645 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Sox6P40645 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sox6P40645 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.56■□□□□ 0.4
Sox6P40645 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.56■□□□□ 0.4
Sox6P40645 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Sox6P40645 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox6P40645 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sox6P40645 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.55■□□□□ 0.4
Sox6P40645 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox6P40645 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sox6P40645 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms