Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Fen1P39749 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.88■□□□□ 0.61
Fen1P39749 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fen1P39749 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fen1P39749 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fen1P39749 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fen1P39749 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Fen1P39749 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Fen1P39749 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.87■□□□□ 0.61
Fen1P39749 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fen1P39749 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fen1P39749 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.87■□□□□ 0.61
Fen1P39749 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Fen1P39749 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Fen1P39749 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.86■□□□□ 0.61
Fen1P39749 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.86■□□□□ 0.61
Fen1P39749 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Fen1P39749 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Fen1P39749 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fen1P39749 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Fen1P39749 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fen1P39749 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fen1P39749 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fen1P39749 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fen1P39749 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fen1P39749 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fen1P39749 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fen1P39749 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fen1P39749 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Fen1P39749 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fen1P39749 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fen1P39749 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fen1P39749 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Fen1P39749 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Fen1P39749 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fen1P39749 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fen1P39749 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fen1P39749 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fen1P39749 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.84■□□□□ 0.61
Fen1P39749 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fen1P39749 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Fen1P39749 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fen1P39749 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fen1P39749 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Fen1P39749 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fen1P39749 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fen1P39749 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Fen1P39749 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fen1P39749 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fen1P39749 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fen1P39749 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Fen1P39749 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fen1P39749 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.83■□□□□ 0.6
Fen1P39749 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Fen1P39749 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Fen1P39749 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fen1P39749 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.83■□□□□ 0.6
Fen1P39749 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fen1P39749 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fen1P39749 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fen1P39749 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fen1P39749 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Fen1P39749 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fen1P39749 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fen1P39749 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.82■□□□□ 0.6
Fen1P39749 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fen1P39749 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fen1P39749 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Fen1P39749 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Fen1P39749 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fen1P39749 Gm22238-201ENSMUST00000175222 88 ntBASIC18.82■□□□□ 0.6
Fen1P39749 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fen1P39749 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.82■□□□□ 0.6
Fen1P39749 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms