Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.53■□□□□ 0.08
Cdkn1aP39689 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdkn1aP39689 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Gm12441-201ENSMUST00000121806 588 ntBASIC15.52■□□□□ 0.08
Cdkn1aP39689 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn1aP39689 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn1aP39689 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn1aP39689 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn1aP39689 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn1aP39689 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.52■□□□□ 0.07
Cdkn1aP39689 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn1aP39689 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.52■□□□□ 0.07
Cdkn1aP39689 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn1aP39689 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn1aP39689 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn1aP39689 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn1aP39689 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
Cdkn1aP39689 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.51■□□□□ 0.07
Cdkn1aP39689 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Gm4968-201ENSMUST00000071458 858 ntBASIC15.51■□□□□ 0.07
Cdkn1aP39689 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.51■□□□□ 0.07
Cdkn1aP39689 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdkn1aP39689 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cdkn1aP39689 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdkn1aP39689 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdkn1aP39689 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cdkn1aP39689 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdkn1aP39689 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdkn1aP39689 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Cdkn1aP39689 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdkn1aP39689 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdkn1aP39689 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.49■□□□□ 0.07
Cdkn1aP39689 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdkn1aP39689 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdkn1aP39689 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdkn1aP39689 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdkn1aP39689 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdkn1aP39689 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.48■□□□□ 0.07
Cdkn1aP39689 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkn1aP39689 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms