Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh4P39038 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh4P39038 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh4P39038 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh4P39038 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh4P39038 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh4P39038 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh4P39038 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.95■□□□□ 0.46
Cdh4P39038 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh4P39038 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cdh4P39038 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cdh4P39038 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.95■□□□□ 0.46
Cdh4P39038 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh4P39038 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cdh4P39038 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.95■□□□□ 0.46
Cdh4P39038 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cdh4P39038 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh4P39038 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh4P39038 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh4P39038 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh4P39038 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh4P39038 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh4P39038 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.95■□□□□ 0.46
Cdh4P39038 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh4P39038 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.94■□□□□ 0.46
Cdh4P39038 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh4P39038 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh4P39038 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh4P39038 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh4P39038 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh4P39038 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh4P39038 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.94■□□□□ 0.46
Cdh4P39038 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh4P39038 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.94■□□□□ 0.46
Cdh4P39038 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh4P39038 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh4P39038 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Cdh4P39038 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cdh4P39038 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.94■□□□□ 0.46
Cdh4P39038 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Cdh4P39038 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh4P39038 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh4P39038 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cdh4P39038 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cdh4P39038 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cdh4P39038 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Cdh4P39038 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh4P39038 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.93■□□□□ 0.46
Cdh4P39038 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cdh4P39038 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh4P39038 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh4P39038 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh4P39038 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh4P39038 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh4P39038 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
Cdh4P39038 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cdh4P39038 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh4P39038 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cdh4P39038 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cdh4P39038 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh4P39038 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh4P39038 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh4P39038 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh4P39038 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.92■□□□□ 0.46
Cdh4P39038 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.92■□□□□ 0.46
Cdh4P39038 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh4P39038 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.92■□□□□ 0.46
Cdh4P39038 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh4P39038 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh4P39038 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh4P39038 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdh4P39038 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdh4P39038 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.91■□□□□ 0.46
Cdh4P39038 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Cdh4P39038 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Cdh4P39038 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh4P39038 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cdh4P39038 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh4P39038 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh4P39038 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cdh4P39038 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh4P39038 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh4P39038 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.9■□□□□ 0.46
Cdh4P39038 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh4P39038 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh4P39038 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh4P39038 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms