Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RetP35546 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RetP35546 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RetP35546 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RetP35546 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RetP35546 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RetP35546 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.58■□□□□ 0.4
RetP35546 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RetP35546 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RetP35546 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RetP35546 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RetP35546 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RetP35546 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RetP35546 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RetP35546 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RetP35546 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RetP35546 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RetP35546 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.57■□□□□ 0.4
RetP35546 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.57■□□□□ 0.4
RetP35546 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RetP35546 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RetP35546 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RetP35546 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RetP35546 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RetP35546 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RetP35546 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RetP35546 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RetP35546 Mir5133-201ENSMUST00000174955 77 ntBASIC17.56■□□□□ 0.4
RetP35546 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.56■□□□□ 0.4
RetP35546 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RetP35546 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RetP35546 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RetP35546 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RetP35546 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RetP35546 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RetP35546 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RetP35546 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RetP35546 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RetP35546 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
RetP35546 Gm27801-201ENSMUST00000184174 223 ntBASIC17.55■□□□□ 0.4
RetP35546 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.55■□□□□ 0.4
RetP35546 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.55■□□□□ 0.4
RetP35546 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RetP35546 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RetP35546 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RetP35546 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RetP35546 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RetP35546 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RetP35546 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RetP35546 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RetP35546 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RetP35546 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RetP35546 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RetP35546 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RetP35546 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.53■□□□□ 0.4
RetP35546 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RetP35546 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RetP35546 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RetP35546 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RetP35546 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RetP35546 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.53■□□□□ 0.4
RetP35546 Gm10653-202ENSMUST00000139570 835 ntBASIC17.53■□□□□ 0.4
RetP35546 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RetP35546 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.53■□□□□ 0.4
RetP35546 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RetP35546 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RetP35546 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RetP35546 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RetP35546 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.53■□□□□ 0.4
RetP35546 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RetP35546 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RetP35546 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RetP35546 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RetP35546 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RetP35546 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.52■□□□□ 0.4
RetP35546 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RetP35546 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RetP35546 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RetP35546 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.52■□□□□ 0.4
RetP35546 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RetP35546 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RetP35546 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RetP35546 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RetP35546 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RetP35546 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RetP35546 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RetP35546 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RetP35546 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RetP35546 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RetP35546 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RetP35546 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RetP35546 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RetP35546 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.51■□□□□ 0.39
RetP35546 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RetP35546 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RetP35546 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RetP35546 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RetP35546 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.51■□□□□ 0.39
RetP35546 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RetP35546 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms