Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sftpa1P35242 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.45■□□□□ 0.38
Sftpa1P35242 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sftpa1P35242 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.45■□□□□ 0.38
Sftpa1P35242 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sftpa1P35242 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sftpa1P35242 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sftpa1P35242 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sftpa1P35242 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sftpa1P35242 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.44■□□□□ 0.38
Sftpa1P35242 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sftpa1P35242 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sftpa1P35242 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sftpa1P35242 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sftpa1P35242 Mir1199-201ENSMUST00000117015 119 ntBASIC17.44■□□□□ 0.38
Sftpa1P35242 Gm11643-201ENSMUST00000119578 864 ntBASIC17.44■□□□□ 0.38
Sftpa1P35242 Gm15378-201ENSMUST00000121894 207 ntBASIC17.44■□□□□ 0.38
Sftpa1P35242 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sftpa1P35242 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sftpa1P35242 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sftpa1P35242 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sftpa1P35242 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.43■□□□□ 0.38
Sftpa1P35242 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.43■□□□□ 0.38
Sftpa1P35242 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.43■□□□□ 0.38
Sftpa1P35242 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.43■□□□□ 0.38
Sftpa1P35242 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.43■□□□□ 0.38
Sftpa1P35242 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sftpa1P35242 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sftpa1P35242 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sftpa1P35242 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sftpa1P35242 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sftpa1P35242 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.42■□□□□ 0.38
Sftpa1P35242 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.42■□□□□ 0.38
Sftpa1P35242 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sftpa1P35242 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sftpa1P35242 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sftpa1P35242 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sftpa1P35242 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.42■□□□□ 0.38
Sftpa1P35242 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sftpa1P35242 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sftpa1P35242 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.41■□□□□ 0.38
Sftpa1P35242 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.41■□□□□ 0.38
Sftpa1P35242 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.41■□□□□ 0.38
Sftpa1P35242 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.41■□□□□ 0.38
Sftpa1P35242 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.41■□□□□ 0.38
Sftpa1P35242 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sftpa1P35242 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.41■□□□□ 0.38
Sftpa1P35242 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sftpa1P35242 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sftpa1P35242 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sftpa1P35242 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Sftpa1P35242 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sftpa1P35242 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sftpa1P35242 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sftpa1P35242 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sftpa1P35242 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sftpa1P35242 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sftpa1P35242 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sftpa1P35242 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.4■□□□□ 0.38
Sftpa1P35242 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sftpa1P35242 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sftpa1P35242 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sftpa1P35242 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sftpa1P35242 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.4■□□□□ 0.38
Sftpa1P35242 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sftpa1P35242 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sftpa1P35242 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sftpa1P35242 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sftpa1P35242 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.4■□□□□ 0.38
Sftpa1P35242 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.4■□□□□ 0.38
Sftpa1P35242 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sftpa1P35242 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sftpa1P35242 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sftpa1P35242 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sftpa1P35242 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sftpa1P35242 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.39■□□□□ 0.37
Sftpa1P35242 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Sftpa1P35242 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Sftpa1P35242 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.39■□□□□ 0.37
Sftpa1P35242 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sftpa1P35242 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sftpa1P35242 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sftpa1P35242 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sftpa1P35242 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sftpa1P35242 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sftpa1P35242 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms