Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cd40P27512 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd40P27512 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.03■□□□□ 0.32
Cd40P27512 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Cd40P27512 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd40P27512 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cd40P27512 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd40P27512 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd40P27512 BC021767-201ENSMUST00000126387 1716 ntBASIC17.03■□□□□ 0.32
Cd40P27512 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cd40P27512 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd40P27512 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cd40P27512 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd40P27512 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd40P27512 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd40P27512 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cd40P27512 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cd40P27512 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd40P27512 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.02■□□□□ 0.32
Cd40P27512 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.02■□□□□ 0.32
Cd40P27512 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd40P27512 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd40P27512 Gm10849-201ENSMUST00000100397 618 ntBASIC17.02■□□□□ 0.32
Cd40P27512 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cd40P27512 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.02■□□□□ 0.32
Cd40P27512 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.02■□□□□ 0.32
Cd40P27512 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cd40P27512 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd40P27512 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.02■□□□□ 0.31
Cd40P27512 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd40P27512 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd40P27512 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd40P27512 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd40P27512 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cd40P27512 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.02■□□□□ 0.31
Cd40P27512 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cd40P27512 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd40P27512 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd40P27512 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd40P27512 Gm7514-201ENSMUST00000209475 934 ntBASIC17.01■□□□□ 0.31
Cd40P27512 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd40P27512 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd40P27512 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.01■□□□□ 0.31
Cd40P27512 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd40P27512 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd40P27512 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cd40P27512 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cd40P27512 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Cd40P27512 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd40P27512 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cd40P27512 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cd40P27512 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cd40P27512 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cd40P27512 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cd40P27512 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cd40P27512 Gm26971-201ENSMUST00000182423 1072 ntBASIC17■□□□□ 0.31
Cd40P27512 Gm19094-201ENSMUST00000209791 1246 ntBASIC17■□□□□ 0.31
Cd40P27512 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cd40P27512 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cd40P27512 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd40P27512 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cd40P27512 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd40P27512 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd40P27512 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cd40P27512 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd40P27512 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cd40P27512 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cd40P27512 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd40P27512 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd40P27512 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd40P27512 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cd40P27512 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd40P27512 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cd40P27512 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.99■□□□□ 0.31
Cd40P27512 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cd40P27512 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd40P27512 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd40P27512 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cd40P27512 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cd40P27512 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd40P27512 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd40P27512 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd40P27512 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd40P27512 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd40P27512 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cd40P27512 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.98■□□□□ 0.31
Cd40P27512 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cd40P27512 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd40P27512 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cd40P27512 Gm26571-201ENSMUST00000181399 666 ntBASIC16.98■□□□□ 0.31
Cd40P27512 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.98■□□□□ 0.31
Cd40P27512 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.98■□□□□ 0.31
Cd40P27512 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Cd40P27512 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cd40P27512 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd40P27512 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd40P27512 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40P27512 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms