Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cbx3P23198 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cbx3P23198 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cbx3P23198 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cbx3P23198 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cbx3P23198 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cbx3P23198 BC021767-201ENSMUST00000126387 1716 ntBASIC17.08■□□□□ 0.32
Cbx3P23198 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.08■□□□□ 0.32
Cbx3P23198 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Cbx3P23198 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.08■□□□□ 0.32
Cbx3P23198 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cbx3P23198 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.08■□□□□ 0.32
Cbx3P23198 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cbx3P23198 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cbx3P23198 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cbx3P23198 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.08■□□□□ 0.32
Cbx3P23198 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cbx3P23198 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cbx3P23198 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cbx3P23198 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.07■□□□□ 0.32
Cbx3P23198 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cbx3P23198 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.07■□□□□ 0.32
Cbx3P23198 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Cbx3P23198 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Cbx3P23198 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cbx3P23198 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.06■□□□□ 0.32
Cbx3P23198 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cbx3P23198 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cbx3P23198 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cbx3P23198 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cbx3P23198 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cbx3P23198 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cbx3P23198 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cbx3P23198 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cbx3P23198 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cbx3P23198 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cbx3P23198 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cbx3P23198 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cbx3P23198 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cbx3P23198 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cbx3P23198 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.05■□□□□ 0.32
Cbx3P23198 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cbx3P23198 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cbx3P23198 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cbx3P23198 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.04■□□□□ 0.32
Cbx3P23198 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cbx3P23198 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cbx3P23198 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cbx3P23198 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cbx3P23198 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cbx3P23198 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cbx3P23198 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cbx3P23198 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cbx3P23198 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.03■□□□□ 0.32
Cbx3P23198 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.03■□□□□ 0.32
Cbx3P23198 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Cbx3P23198 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cbx3P23198 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cbx3P23198 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms