Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RarbP22605 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.88■□□□□ 0.93
RarbP22605 Gm44549-201ENSMUST00000208351 577 ntBASIC20.88■□□□□ 0.93
RarbP22605 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RarbP22605 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RarbP22605 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RarbP22605 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RarbP22605 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RarbP22605 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.87■□□□□ 0.93
RarbP22605 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RarbP22605 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RarbP22605 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RarbP22605 Gm715-201ENSMUST00000117865 831 ntBASIC20.87■□□□□ 0.93
RarbP22605 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RarbP22605 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.87■□□□□ 0.93
RarbP22605 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RarbP22605 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RarbP22605 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RarbP22605 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RarbP22605 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RarbP22605 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RarbP22605 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.86■□□□□ 0.93
RarbP22605 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RarbP22605 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RarbP22605 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RarbP22605 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.86■□□□□ 0.93
RarbP22605 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RarbP22605 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RarbP22605 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RarbP22605 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RarbP22605 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RarbP22605 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RarbP22605 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RarbP22605 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RarbP22605 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RarbP22605 Gm11249-201ENSMUST00000117071 859 ntBASIC20.85■□□□□ 0.93
RarbP22605 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.85■□□□□ 0.93
RarbP22605 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.85■□□□□ 0.93
RarbP22605 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RarbP22605 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RarbP22605 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RarbP22605 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RarbP22605 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RarbP22605 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
RarbP22605 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RarbP22605 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.84■□□□□ 0.93
RarbP22605 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RarbP22605 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RarbP22605 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.84■□□□□ 0.93
RarbP22605 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RarbP22605 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RarbP22605 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RarbP22605 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RarbP22605 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RarbP22605 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RarbP22605 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RarbP22605 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RarbP22605 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RarbP22605 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
RarbP22605 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.83■□□□□ 0.93
RarbP22605 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.83■□□□□ 0.93
RarbP22605 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RarbP22605 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RarbP22605 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RarbP22605 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.83■□□□□ 0.93
RarbP22605 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RarbP22605 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
RarbP22605 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RarbP22605 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.82■□□□□ 0.92
RarbP22605 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.82■□□□□ 0.92
RarbP22605 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RarbP22605 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
RarbP22605 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RarbP22605 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.81■□□□□ 0.92
RarbP22605 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RarbP22605 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RarbP22605 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.81■□□□□ 0.92
RarbP22605 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RarbP22605 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RarbP22605 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.81■□□□□ 0.92
RarbP22605 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RarbP22605 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RarbP22605 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RarbP22605 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RarbP22605 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RarbP22605 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RarbP22605 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RarbP22605 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.8■□□□□ 0.92
RarbP22605 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms