Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp6P0C0A3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.41■□□□□ 0.86
Chmp6P0C0A3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.41■□□□□ 0.86
Chmp6P0C0A3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.41■□□□□ 0.86
Chmp6P0C0A3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.4■□□□□ 0.86
Chmp6P0C0A3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp6P0C0A3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.4■□□□□ 0.86
Chmp6P0C0A3 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.4■□□□□ 0.86
Chmp6P0C0A3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp6P0C0A3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Chmp6P0C0A3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp6P0C0A3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp6P0C0A3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.39■□□□□ 0.85
Chmp6P0C0A3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp6P0C0A3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.39■□□□□ 0.85
Chmp6P0C0A3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Chmp6P0C0A3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Chmp6P0C0A3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp6P0C0A3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
Chmp6P0C0A3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp6P0C0A3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp6P0C0A3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp6P0C0A3 Gm13234-201ENSMUST00000120010 747 ntBASIC20.38■□□□□ 0.85
Chmp6P0C0A3 Gm38205-201ENSMUST00000192243 258 ntBASIC20.38■□□□□ 0.85
Chmp6P0C0A3 Gm42569-201ENSMUST00000200539 472 ntBASIC20.38■□□□□ 0.85
Chmp6P0C0A3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp6P0C0A3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp6P0C0A3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp6P0C0A3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Chmp6P0C0A3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp6P0C0A3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Chmp6P0C0A3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp6P0C0A3 Gm26571-201ENSMUST00000181399 666 ntBASIC20.35■□□□□ 0.85
Chmp6P0C0A3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp6P0C0A3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp6P0C0A3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp6P0C0A3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp6P0C0A3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Golph3-205ENSMUST00000228671 2842 ntBASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Gm7860-201ENSMUST00000121190 879 ntBASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp6P0C0A3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.33■□□□□ 0.85
Chmp6P0C0A3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp6P0C0A3 Gm10033-202ENSMUST00000211874 928 ntBASIC20.33■□□□□ 0.85
Chmp6P0C0A3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms