Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
LtaP09225 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LtaP09225 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Gm37179-201ENSMUST00000194862 823 ntBASIC15.33■□□□□ 0.04
LtaP09225 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.33■□□□□ 0.04
LtaP09225 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.33■□□□□ 0.04
LtaP09225 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.33■□□□□ 0.04
LtaP09225 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
LtaP09225 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LtaP09225 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LtaP09225 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LtaP09225 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtaP09225 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtaP09225 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LtaP09225 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtaP09225 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LtaP09225 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LtaP09225 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.32■□□□□ 0.04
LtaP09225 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.32■□□□□ 0.04
LtaP09225 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LtaP09225 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtaP09225 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtaP09225 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LtaP09225 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
LtaP09225 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LtaP09225 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LtaP09225 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LtaP09225 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
LtaP09225 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LtaP09225 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtaP09225 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtaP09225 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LtaP09225 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.31■□□□□ 0.04
LtaP09225 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtaP09225 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtaP09225 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LtaP09225 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtaP09225 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtaP09225 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtaP09225 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtaP09225 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtaP09225 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtaP09225 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtaP09225 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
LtaP09225 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.3■□□□□ 0.04
LtaP09225 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LtaP09225 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtaP09225 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.3■□□□□ 0.04
LtaP09225 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LtaP09225 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtaP09225 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtaP09225 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LtaP09225 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.3■□□□□ 0.04
LtaP09225 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtaP09225 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LtaP09225 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.29■□□□□ 0.04
LtaP09225 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.29■□□□□ 0.04
LtaP09225 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtaP09225 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LtaP09225 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LtaP09225 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LtaP09225 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LtaP09225 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.28■□□□□ 0.04
LtaP09225 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LtaP09225 Gm6420-201ENSMUST00000193885 723 ntBASIC15.28■□□□□ 0.04
LtaP09225 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LtaP09225 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LtaP09225 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.28■□□□□ 0.04
LtaP09225 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LtaP09225 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LtaP09225 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LtaP09225 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LtaP09225 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LtaP09225 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LtaP09225 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LtaP09225 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LtaP09225 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LtaP09225 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms