Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col4a2P08122 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a2P08122 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a2P08122 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Col4a2P08122 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a2P08122 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a2P08122 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Col4a2P08122 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a2P08122 Gm11249-201ENSMUST00000117071 859 ntBASIC17.71■□□□□ 0.43
Col4a2P08122 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a2P08122 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a2P08122 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a2P08122 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.71■□□□□ 0.43
Col4a2P08122 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a2P08122 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a2P08122 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a2P08122 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.7■□□□□ 0.42
Col4a2P08122 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a2P08122 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.7■□□□□ 0.42
Col4a2P08122 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col4a2P08122 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a2P08122 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.69■□□□□ 0.42
Col4a2P08122 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a2P08122 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a2P08122 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.69■□□□□ 0.42
Col4a2P08122 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a2P08122 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Col4a2P08122 Gm37055-201ENSMUST00000191866 133 ntBASIC17.69■□□□□ 0.42
Col4a2P08122 Gm44549-201ENSMUST00000208351 577 ntBASIC17.69■□□□□ 0.42
Col4a2P08122 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.69■□□□□ 0.42
Col4a2P08122 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a2P08122 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a2P08122 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a2P08122 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a2P08122 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a2P08122 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a2P08122 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Col4a2P08122 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a2P08122 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a2P08122 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a2P08122 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 Gm2399-201ENSMUST00000104944 225 ntBASIC17.67■□□□□ 0.42
Col4a2P08122 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.67■□□□□ 0.42
Col4a2P08122 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.67■□□□□ 0.42
Col4a2P08122 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.67■□□□□ 0.42
Col4a2P08122 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.67■□□□□ 0.42
Col4a2P08122 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Col4a2P08122 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.67■□□□□ 0.42
Col4a2P08122 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.67■□□□□ 0.42
Col4a2P08122 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Col4a2P08122 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Col4a2P08122 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a2P08122 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a2P08122 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a2P08122 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.66■□□□□ 0.42
Col4a2P08122 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a2P08122 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a2P08122 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Col4a2P08122 Gm18666-201ENSMUST00000190039 958 ntBASIC17.66■□□□□ 0.42
Col4a2P08122 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a2P08122 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col4a2P08122 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a2P08122 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a2P08122 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a2P08122 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.65■□□□□ 0.42
Col4a2P08122 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a2P08122 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a2P08122 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a2P08122 Mir1199-201ENSMUST00000117015 119 ntBASIC17.65■□□□□ 0.42
Col4a2P08122 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a2P08122 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.65■□□□□ 0.42
Col4a2P08122 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a2P08122 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a2P08122 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Col4a2P08122 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.64■□□□□ 0.41
Col4a2P08122 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.64■□□□□ 0.41
Col4a2P08122 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 Gm15565-201ENSMUST00000118890 427 ntBASIC17.64■□□□□ 0.41
Col4a2P08122 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a2P08122 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms