Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TnfP06804 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TnfP06804 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TnfP06804 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TnfP06804 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TnfP06804 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TnfP06804 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TnfP06804 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TnfP06804 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.03■□□□□ 0.8
TnfP06804 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TnfP06804 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TnfP06804 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
TnfP06804 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.03■□□□□ 0.8
TnfP06804 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
TnfP06804 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TnfP06804 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TnfP06804 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TnfP06804 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TnfP06804 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TnfP06804 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TnfP06804 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TnfP06804 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
TnfP06804 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TnfP06804 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TnfP06804 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
TnfP06804 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.02■□□□□ 0.8
TnfP06804 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TnfP06804 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TnfP06804 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TnfP06804 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TnfP06804 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TnfP06804 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
TnfP06804 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TnfP06804 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TnfP06804 Golph3-202ENSMUST00000226517 2359 ntBASIC20.01■□□□□ 0.79
TnfP06804 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TnfP06804 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TnfP06804 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TnfP06804 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TnfP06804 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TnfP06804 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TnfP06804 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TnfP06804 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TnfP06804 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.01■□□□□ 0.79
TnfP06804 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TnfP06804 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.01■□□□□ 0.79
TnfP06804 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TnfP06804 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TnfP06804 Gm10167-201ENSMUST00000150411 1479 ntBASIC20■□□□□ 0.79
TnfP06804 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20■□□□□ 0.79
TnfP06804 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20■□□□□ 0.79
TnfP06804 Gm26524-201ENSMUST00000192339 390 ntBASIC20■□□□□ 0.79
TnfP06804 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20■□□□□ 0.79
TnfP06804 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20■□□□□ 0.79
TnfP06804 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
TnfP06804 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TnfP06804 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TnfP06804 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TnfP06804 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TnfP06804 Gm12527-201ENSMUST00000117967 564 ntBASIC19.99■□□□□ 0.79
TnfP06804 Gm10653-202ENSMUST00000139570 835 ntBASIC19.99■□□□□ 0.79
TnfP06804 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.99■□□□□ 0.79
TnfP06804 Rab3c-203ENSMUST00000224180 967 ntBASIC19.99■□□□□ 0.79
TnfP06804 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TnfP06804 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TnfP06804 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TnfP06804 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.99■□□□□ 0.79
TnfP06804 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TnfP06804 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TnfP06804 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TnfP06804 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TnfP06804 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.98■□□□□ 0.79
TnfP06804 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TnfP06804 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.98■□□□□ 0.79
TnfP06804 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.98■□□□□ 0.79
TnfP06804 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TnfP06804 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TnfP06804 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TnfP06804 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.97■□□□□ 0.79
TnfP06804 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TnfP06804 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TnfP06804 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TnfP06804 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TnfP06804 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TnfP06804 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TnfP06804 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
TnfP06804 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.96■□□□□ 0.79
TnfP06804 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms