Protein–RNA interactions for Protein: P04943

Ig kappa chain V-VI region NQ6-8.3.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04943 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.17■□□□□ 0.02
P04943 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
P04943 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
P04943 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
P04943 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.17■□□□□ 0.02
P04943 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04943 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.16■□□□□ 0.02
P04943 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04943 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04943 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04943 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.16■□□□□ 0.02
P04943 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04943 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04943 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04943 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04943 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.16■□□□□ 0.02
P04943 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04943 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04943 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.16■□□□□ 0.02
P04943 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.15■□□□□ 0.02
P04943 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04943 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
P04943 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04943 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04943 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04943 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04943 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04943 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04943 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
P04943 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04943 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04943 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
P04943 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.14■□□□□ 0.01
P04943 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04943 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.14■□□□□ 0.01
P04943 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.14■□□□□ 0.01
P04943 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.14■□□□□ 0.01
P04943 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.14■□□□□ 0.01
P04943 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04943 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.13■□□□□ 0.01
P04943 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
P04943 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
P04943 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04943 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04943 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04943 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.12■□□□□ 0.01
P04943 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04943 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04943 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04943 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
P04943 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
P04943 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
P04943 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
P04943 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
P04943 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms