Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H3f3cP02301 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H3f3cP02301 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H3f3cP02301 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.09■□□□□ 0.17
H3f3cP02301 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.09■□□□□ 0.17
H3f3cP02301 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
H3f3cP02301 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
H3f3cP02301 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
H3f3cP02301 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
H3f3cP02301 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H3f3cP02301 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.08■□□□□ 0.17
H3f3cP02301 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
H3f3cP02301 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
H3f3cP02301 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H3f3cP02301 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
H3f3cP02301 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
H3f3cP02301 Gm13234-201ENSMUST00000120010 747 ntBASIC16.08■□□□□ 0.16
H3f3cP02301 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.08■□□□□ 0.16
H3f3cP02301 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.08■□□□□ 0.16
H3f3cP02301 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H3f3cP02301 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H3f3cP02301 Reep4-203ENSMUST00000226563 1444 ntBASIC16.08■□□□□ 0.16
H3f3cP02301 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H3f3cP02301 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H3f3cP02301 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H3f3cP02301 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
H3f3cP02301 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H3f3cP02301 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
H3f3cP02301 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3f3cP02301 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3f3cP02301 Gm13146-201ENSMUST00000118508 780 ntBASIC16.07■□□□□ 0.16
H3f3cP02301 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3f3cP02301 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3f3cP02301 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3f3cP02301 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3f3cP02301 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
H3f3cP02301 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H3f3cP02301 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3f3cP02301 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3f3cP02301 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3f3cP02301 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3f3cP02301 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H3f3cP02301 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
H3f3cP02301 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.06■□□□□ 0.16
H3f3cP02301 Gm38205-201ENSMUST00000192243 258 ntBASIC16.06■□□□□ 0.16
H3f3cP02301 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.06■□□□□ 0.16
H3f3cP02301 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
H3f3cP02301 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
H3f3cP02301 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3f3cP02301 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H3f3cP02301 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3f3cP02301 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
H3f3cP02301 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
H3f3cP02301 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
H3f3cP02301 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H3f3cP02301 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
H3f3cP02301 Gm42778-201ENSMUST00000199644 553 ntBASIC16.05■□□□□ 0.16
H3f3cP02301 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.05■□□□□ 0.16
H3f3cP02301 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3f3cP02301 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3f3cP02301 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
H3f3cP02301 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
H3f3cP02301 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3f3cP02301 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H3f3cP02301 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
H3f3cP02301 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
H3f3cP02301 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H3f3cP02301 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.04■□□□□ 0.16
H3f3cP02301 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H3f3cP02301 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.04■□□□□ 0.16
H3f3cP02301 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H3f3cP02301 Gm42642-201ENSMUST00000200683 355 ntBASIC16.04■□□□□ 0.16
H3f3cP02301 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.04■□□□□ 0.16
H3f3cP02301 Gm10033-202ENSMUST00000211874 928 ntBASIC16.04■□□□□ 0.16
H3f3cP02301 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H3f3cP02301 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H3f3cP02301 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
H3f3cP02301 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
H3f3cP02301 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
H3f3cP02301 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H3f3cP02301 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H3f3cP02301 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H3f3cP02301 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
H3f3cP02301 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.03■□□□□ 0.16
H3f3cP02301 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
H3f3cP02301 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.03■□□□□ 0.16
H3f3cP02301 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H3f3cP02301 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H3f3cP02301 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H3f3cP02301 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H3f3cP02301 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
H3f3cP02301 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.03■□□□□ 0.16
H3f3cP02301 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.03■□□□□ 0.16
H3f3cP02301 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H3f3cP02301 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 313.5 ms