Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp1O89090 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Sp1O89090 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp1O89090 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sp1O89090 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sp1O89090 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Sp1O89090 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp1O89090 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.1■□□□□ 0.65
Sp1O89090 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp1O89090 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp1O89090 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.1■□□□□ 0.65
Sp1O89090 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp1O89090 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp1O89090 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp1O89090 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp1O89090 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sp1O89090 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sp1O89090 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Sp1O89090 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.09■□□□□ 0.65
Sp1O89090 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp1O89090 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Sp1O89090 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp1O89090 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp1O89090 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sp1O89090 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp1O89090 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sp1O89090 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sp1O89090 Gm26524-201ENSMUST00000192339 390 ntBASIC19.08■□□□□ 0.64
Sp1O89090 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.08■□□□□ 0.64
Sp1O89090 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sp1O89090 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.08■□□□□ 0.64
Sp1O89090 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.08■□□□□ 0.64
Sp1O89090 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sp1O89090 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sp1O89090 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sp1O89090 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sp1O89090 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sp1O89090 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp1O89090 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp1O89090 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp1O89090 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Sp1O89090 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp1O89090 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.07■□□□□ 0.64
Sp1O89090 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.07■□□□□ 0.64
Sp1O89090 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.07■□□□□ 0.64
Sp1O89090 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.07■□□□□ 0.64
Sp1O89090 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp1O89090 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.07■□□□□ 0.64
Sp1O89090 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Sp1O89090 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sp1O89090 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp1O89090 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp1O89090 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sp1O89090 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sp1O89090 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.06■□□□□ 0.64
Sp1O89090 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.06■□□□□ 0.64
Sp1O89090 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp1O89090 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Sp1O89090 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.06■□□□□ 0.64
Sp1O89090 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp1O89090 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sp1O89090 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sp1O89090 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.05■□□□□ 0.64
Sp1O89090 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp1O89090 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp1O89090 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp1O89090 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Sp1O89090 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp1O89090 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.05■□□□□ 0.64
Sp1O89090 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.05■□□□□ 0.64
Sp1O89090 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sp1O89090 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp1O89090 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Sp1O89090 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp1O89090 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sp1O89090 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp1O89090 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp1O89090 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp1O89090 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sp1O89090 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp1O89090 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.04■□□□□ 0.64
Sp1O89090 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sp1O89090 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Sp1O89090 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp1O89090 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp1O89090 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sp1O89090 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp1O89090 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp1O89090 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.03■□□□□ 0.64
Sp1O89090 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp1O89090 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp1O89090 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp1O89090 Gm12527-201ENSMUST00000117967 564 ntBASIC19.03■□□□□ 0.64
Sp1O89090 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sp1O89090 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.03■□□□□ 0.64
Sp1O89090 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp1O89090 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sp1O89090 Rab3c-203ENSMUST00000224180 967 ntBASIC19.03■□□□□ 0.64
Sp1O89090 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sp1O89090 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms