Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CopeO89079 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CopeO89079 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.4■□□□□ 0.7
CopeO89079 Rps24-207ENSMUST00000224568 714 ntBASIC19.4■□□□□ 0.7
CopeO89079 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CopeO89079 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CopeO89079 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CopeO89079 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CopeO89079 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CopeO89079 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
CopeO89079 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.39■□□□□ 0.69
CopeO89079 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopeO89079 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.39■□□□□ 0.69
CopeO89079 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CopeO89079 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopeO89079 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CopeO89079 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopeO89079 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.39■□□□□ 0.69
CopeO89079 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopeO89079 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopeO89079 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CopeO89079 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopeO89079 Grk6-206ENSMUST00000224995 2971 ntBASIC19.39■□□□□ 0.69
CopeO89079 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
CopeO89079 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CopeO89079 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.39■□□□□ 0.69
CopeO89079 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopeO89079 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopeO89079 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CopeO89079 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CopeO89079 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.38■□□□□ 0.69
CopeO89079 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.38■□□□□ 0.69
CopeO89079 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CopeO89079 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CopeO89079 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.38■□□□□ 0.69
CopeO89079 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CopeO89079 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.38■□□□□ 0.69
CopeO89079 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CopeO89079 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopeO89079 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopeO89079 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopeO89079 Gm12922-201ENSMUST00000120626 809 ntBASIC19.37■□□□□ 0.69
CopeO89079 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.37■□□□□ 0.69
CopeO89079 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopeO89079 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CopeO89079 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopeO89079 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CopeO89079 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.36■□□□□ 0.69
CopeO89079 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.36■□□□□ 0.69
CopeO89079 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.36■□□□□ 0.69
CopeO89079 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.36■□□□□ 0.69
CopeO89079 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CopeO89079 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CopeO89079 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CopeO89079 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.35■□□□□ 0.69
CopeO89079 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.35■□□□□ 0.69
CopeO89079 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.35■□□□□ 0.69
CopeO89079 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.35■□□□□ 0.69
CopeO89079 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CopeO89079 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CopeO89079 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CopeO89079 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopeO89079 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopeO89079 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopeO89079 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.34■□□□□ 0.69
CopeO89079 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopeO89079 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.34■□□□□ 0.69
CopeO89079 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.34■□□□□ 0.69
CopeO89079 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.34■□□□□ 0.69
CopeO89079 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CopeO89079 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopeO89079 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.34■□□□□ 0.69
CopeO89079 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CopeO89079 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CopeO89079 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms