Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.28□□□□□ -0.28
Sh2d1aO88890 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh2d1aO88890 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh2d1aO88890 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.27□□□□□ -0.28
Sh2d1aO88890 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh2d1aO88890 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh2d1aO88890 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh2d1aO88890 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh2d1aO88890 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh2d1aO88890 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh2d1aO88890 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh2d1aO88890 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sh2d1aO88890 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh2d1aO88890 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh2d1aO88890 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh2d1aO88890 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh2d1aO88890 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh2d1aO88890 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sh2d1aO88890 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sh2d1aO88890 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Sh2d1aO88890 Gm11421-201ENSMUST00000122124 294 ntBASIC13.26□□□□□ -0.29
Sh2d1aO88890 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh2d1aO88890 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Sh2d1aO88890 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sh2d1aO88890 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sh2d1aO88890 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.26□□□□□ -0.29
Sh2d1aO88890 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh2d1aO88890 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh2d1aO88890 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sh2d1aO88890 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh2d1aO88890 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh2d1aO88890 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh2d1aO88890 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Smad6-203ENSMUST00000179458 273 ntBASIC13.25□□□□□ -0.29
Sh2d1aO88890 Gm43173-201ENSMUST00000202246 593 ntBASIC13.25□□□□□ -0.29
Sh2d1aO88890 Gm40848-201ENSMUST00000221998 324 ntBASIC13.25□□□□□ -0.29
Sh2d1aO88890 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh2d1aO88890 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.24□□□□□ -0.29
Sh2d1aO88890 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Gm43017-201ENSMUST00000198296 752 ntBASIC13.24□□□□□ -0.29
Sh2d1aO88890 Gm6139-201ENSMUST00000079261 882 ntBASIC13.24□□□□□ -0.29
Sh2d1aO88890 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sh2d1aO88890 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh2d1aO88890 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.23□□□□□ -0.29
Sh2d1aO88890 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh2d1aO88890 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms