Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Hcn3O88705 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Hcn3O88705 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn3O88705 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn3O88705 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn3O88705 Gm7856-201ENSMUST00000117514 1493 ntBASIC18■□□□□ 0.47
Hcn3O88705 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn3O88705 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18■□□□□ 0.47
Hcn3O88705 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.99■□□□□ 0.47
Hcn3O88705 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Hcn3O88705 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hcn3O88705 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
Hcn3O88705 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.99■□□□□ 0.47
Hcn3O88705 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.99■□□□□ 0.47
Hcn3O88705 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.99■□□□□ 0.47
Hcn3O88705 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.99■□□□□ 0.47
Hcn3O88705 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Hcn3O88705 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Hcn3O88705 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn3O88705 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.98■□□□□ 0.47
Hcn3O88705 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hcn3O88705 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hcn3O88705 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hcn3O88705 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hcn3O88705 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.98■□□□□ 0.47
Hcn3O88705 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn3O88705 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.97■□□□□ 0.47
Hcn3O88705 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn3O88705 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn3O88705 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn3O88705 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.97■□□□□ 0.47
Hcn3O88705 Gm9847-201ENSMUST00000052528 599 ntBASIC17.97■□□□□ 0.47
Hcn3O88705 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Hcn3O88705 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn3O88705 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.97■□□□□ 0.47
Hcn3O88705 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.97■□□□□ 0.47
Hcn3O88705 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.96■□□□□ 0.47
Hcn3O88705 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn3O88705 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hcn3O88705 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn3O88705 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn3O88705 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Hcn3O88705 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn3O88705 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.96■□□□□ 0.47
Hcn3O88705 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn3O88705 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn3O88705 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn3O88705 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn3O88705 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn3O88705 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn3O88705 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.96■□□□□ 0.46
Hcn3O88705 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hcn3O88705 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hcn3O88705 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn3O88705 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn3O88705 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.95■□□□□ 0.46
Hcn3O88705 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn3O88705 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn3O88705 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.95■□□□□ 0.46
Hcn3O88705 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn3O88705 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.95■□□□□ 0.46
Hcn3O88705 Golgb1-201ENSMUST00000023534 498 ntBASIC17.95■□□□□ 0.46
Hcn3O88705 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn3O88705 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn3O88705 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn3O88705 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Hcn3O88705 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.95■□□□□ 0.46
Hcn3O88705 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hcn3O88705 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn3O88705 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn3O88705 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.95■□□□□ 0.46
Hcn3O88705 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn3O88705 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn3O88705 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn3O88705 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn3O88705 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn3O88705 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms