Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ClppO88696 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ClppO88696 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.26■□□□□ 0.51
ClppO88696 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClppO88696 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClppO88696 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ClppO88696 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ClppO88696 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ClppO88696 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClppO88696 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ClppO88696 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ClppO88696 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ClppO88696 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ClppO88696 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClppO88696 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClppO88696 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ClppO88696 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ClppO88696 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClppO88696 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClppO88696 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClppO88696 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.25■□□□□ 0.51
ClppO88696 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClppO88696 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClppO88696 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClppO88696 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClppO88696 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClppO88696 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Gm7290-201ENSMUST00000104990 617 ntBASIC18.24■□□□□ 0.51
ClppO88696 Gm12918-201ENSMUST00000120234 636 ntBASIC18.24■□□□□ 0.51
ClppO88696 Gm15710-201ENSMUST00000121821 636 ntBASIC18.24■□□□□ 0.51
ClppO88696 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ClppO88696 Mir5133-201ENSMUST00000174955 77 ntBASIC18.24■□□□□ 0.51
ClppO88696 Gm5075-201ENSMUST00000196916 622 ntBASIC18.24■□□□□ 0.51
ClppO88696 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.24■□□□□ 0.51
ClppO88696 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.24■□□□□ 0.51
ClppO88696 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.24■□□□□ 0.51
ClppO88696 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.24■□□□□ 0.51
ClppO88696 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.24■□□□□ 0.51
ClppO88696 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClppO88696 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ClppO88696 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.23■□□□□ 0.51
ClppO88696 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ClppO88696 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ClppO88696 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClppO88696 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ClppO88696 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ClppO88696 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClppO88696 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClppO88696 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClppO88696 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClppO88696 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ClppO88696 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ClppO88696 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.22■□□□□ 0.51
ClppO88696 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClppO88696 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ClppO88696 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.22■□□□□ 0.51
ClppO88696 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ClppO88696 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClppO88696 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClppO88696 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClppO88696 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClppO88696 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClppO88696 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClppO88696 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ClppO88696 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClppO88696 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.21■□□□□ 0.51
ClppO88696 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ClppO88696 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.21■□□□□ 0.51
ClppO88696 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ClppO88696 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ClppO88696 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms