Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20bO88575 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Slc6a20bO88575 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Slc6a20bO88575 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Slc6a20bO88575 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a20bO88575 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a20bO88575 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a20bO88575 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.65■□□□□ 0.9
Slc6a20bO88575 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a20bO88575 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Slc6a20bO88575 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc6a20bO88575 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Slc6a20bO88575 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a20bO88575 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.64■□□□□ 0.89
Slc6a20bO88575 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Slc6a20bO88575 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.64■□□□□ 0.89
Slc6a20bO88575 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Slc6a20bO88575 Gm21362-201ENSMUST00000194272 928 ntBASIC20.64■□□□□ 0.89
Slc6a20bO88575 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.64■□□□□ 0.89
Slc6a20bO88575 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Slc6a20bO88575 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a20bO88575 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.64■□□□□ 0.89
Slc6a20bO88575 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20bO88575 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20bO88575 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20bO88575 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20bO88575 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Slc6a20bO88575 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Slc6a20bO88575 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20bO88575 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20bO88575 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20bO88575 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20bO88575 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20bO88575 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20bO88575 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.61■□□□□ 0.89
Slc6a20bO88575 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20bO88575 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20bO88575 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Slc6a20bO88575 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20bO88575 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20bO88575 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.61■□□□□ 0.89
Slc6a20bO88575 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20bO88575 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.61■□□□□ 0.89
Slc6a20bO88575 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.61■□□□□ 0.89
Slc6a20bO88575 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20bO88575 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20bO88575 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20bO88575 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20bO88575 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Slc6a20bO88575 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20bO88575 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20bO88575 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20bO88575 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20bO88575 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20bO88575 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.6■□□□□ 0.89
Slc6a20bO88575 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.6■□□□□ 0.89
Slc6a20bO88575 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.6■□□□□ 0.89
Slc6a20bO88575 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20bO88575 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20bO88575 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Slc6a20bO88575 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20bO88575 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20bO88575 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20bO88575 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a20bO88575 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a20bO88575 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a20bO88575 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.59■□□□□ 0.89
Slc6a20bO88575 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a20bO88575 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a20bO88575 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.59■□□□□ 0.89
Slc6a20bO88575 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Slc6a20bO88575 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a20bO88575 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a20bO88575 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a20bO88575 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a20bO88575 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a20bO88575 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a20bO88575 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a20bO88575 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.58■□□□□ 0.89
Slc6a20bO88575 Gm11927-201ENSMUST00000118472 759 ntBASIC20.58■□□□□ 0.89
Slc6a20bO88575 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Slc6a20bO88575 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a20bO88575 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a20bO88575 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a20bO88575 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.58■□□□□ 0.88
Slc6a20bO88575 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc6a20bO88575 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms