Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.47■□□□□ 0.55
Cacna1hO88427 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1hO88427 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1hO88427 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1hO88427 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1hO88427 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1hO88427 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1hO88427 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1hO88427 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1hO88427 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1hO88427 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cacna1hO88427 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1hO88427 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cacna1hO88427 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Cacna1hO88427 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cacna1hO88427 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1hO88427 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1hO88427 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cacna1hO88427 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cacna1hO88427 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1hO88427 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1hO88427 Gm17661-201ENSMUST00000170317 270 ntBASIC18.45■□□□□ 0.54
Cacna1hO88427 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1hO88427 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1hO88427 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1hO88427 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1hO88427 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1hO88427 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1hO88427 Gm7153-201ENSMUST00000117092 455 ntBASIC18.44■□□□□ 0.54
Cacna1hO88427 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.44■□□□□ 0.54
Cacna1hO88427 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Cacna1hO88427 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.44■□□□□ 0.54
Cacna1hO88427 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1hO88427 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1hO88427 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1hO88427 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Cacna1hO88427 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1hO88427 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.44■□□□□ 0.54
Cacna1hO88427 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1hO88427 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1hO88427 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1hO88427 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1hO88427 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.43■□□□□ 0.54
Cacna1hO88427 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1hO88427 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1hO88427 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1hO88427 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1hO88427 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Cacna1hO88427 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1hO88427 Flg-201ENSMUST00000050758 1488 ntBASIC18.43■□□□□ 0.54
Cacna1hO88427 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.42■□□□□ 0.54
Cacna1hO88427 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1hO88427 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1hO88427 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.42■□□□□ 0.54
Cacna1hO88427 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1hO88427 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1hO88427 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cacna1hO88427 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1hO88427 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cacna1hO88427 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1hO88427 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1hO88427 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1hO88427 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1hO88427 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1hO88427 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1hO88427 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1hO88427 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1hO88427 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Cacna1hO88427 Gm43514-201ENSMUST00000198852 424 ntBASIC18.4■□□□□ 0.54
Cacna1hO88427 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1hO88427 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1hO88427 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1hO88427 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1hO88427 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.4■□□□□ 0.54
Cacna1hO88427 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cacna1hO88427 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cacna1hO88427 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1hO88427 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1hO88427 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1hO88427 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1hO88427 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1hO88427 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1hO88427 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1hO88427 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.39■□□□□ 0.53
Cacna1hO88427 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.39■□□□□ 0.53
Cacna1hO88427 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.39■□□□□ 0.53
Cacna1hO88427 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1hO88427 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Cacna1hO88427 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1hO88427 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.38■□□□□ 0.53
Cacna1hO88427 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.38■□□□□ 0.53
Cacna1hO88427 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1hO88427 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1hO88427 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cacna1hO88427 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1hO88427 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1hO88427 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1hO88427 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms