Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tulp3O88413 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.55■□□□□ 0.4
Tulp3O88413 Gm15546-201ENSMUST00000122095 826 ntBASIC17.55■□□□□ 0.4
Tulp3O88413 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tulp3O88413 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tulp3O88413 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tulp3O88413 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tulp3O88413 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.55■□□□□ 0.4
Tulp3O88413 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tulp3O88413 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tulp3O88413 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tulp3O88413 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tulp3O88413 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.54■□□□□ 0.4
Tulp3O88413 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tulp3O88413 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tulp3O88413 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tulp3O88413 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tulp3O88413 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tulp3O88413 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.54■□□□□ 0.4
Tulp3O88413 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tulp3O88413 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tulp3O88413 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tulp3O88413 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tulp3O88413 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tulp3O88413 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tulp3O88413 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tulp3O88413 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tulp3O88413 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tulp3O88413 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tulp3O88413 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tulp3O88413 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.53■□□□□ 0.4
Tulp3O88413 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.53■□□□□ 0.4
Tulp3O88413 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tulp3O88413 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tulp3O88413 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tulp3O88413 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tulp3O88413 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tulp3O88413 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tulp3O88413 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tulp3O88413 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
Tulp3O88413 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tulp3O88413 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tulp3O88413 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tulp3O88413 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tulp3O88413 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tulp3O88413 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tulp3O88413 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tulp3O88413 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Tulp3O88413 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.52■□□□□ 0.4
Tulp3O88413 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.52■□□□□ 0.4
Tulp3O88413 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.52■□□□□ 0.4
Tulp3O88413 Gm9959-201ENSMUST00000068277 390 ntBASIC17.52■□□□□ 0.4
Tulp3O88413 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tulp3O88413 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tulp3O88413 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.52■□□□□ 0.39
Tulp3O88413 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tulp3O88413 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.52■□□□□ 0.39
Tulp3O88413 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Tulp3O88413 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.52■□□□□ 0.39
Tulp3O88413 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tulp3O88413 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tulp3O88413 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tulp3O88413 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tulp3O88413 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tulp3O88413 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tulp3O88413 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tulp3O88413 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tulp3O88413 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tulp3O88413 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tulp3O88413 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tulp3O88413 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tulp3O88413 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tulp3O88413 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tulp3O88413 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Tulp3O88413 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.5■□□□□ 0.39
Tulp3O88413 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tulp3O88413 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tulp3O88413 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tulp3O88413 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tulp3O88413 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Tulp3O88413 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tulp3O88413 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Tulp3O88413 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.5■□□□□ 0.39
Tulp3O88413 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tulp3O88413 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tulp3O88413 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tulp3O88413 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tulp3O88413 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tulp3O88413 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tulp3O88413 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tulp3O88413 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.49■□□□□ 0.39
Tulp3O88413 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tulp3O88413 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.49■□□□□ 0.39
Tulp3O88413 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tulp3O88413 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tulp3O88413 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tulp3O88413 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tulp3O88413 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
Tulp3O88413 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tulp3O88413 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms