Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm11927-201ENSMUST00000118472 759 ntBASIC24.75■■□□□ 1.55
Ubr1O70481 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ubr1O70481 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Ubr1O70481 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC24.75■■□□□ 1.55
Ubr1O70481 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC24.75■■□□□ 1.55
Ubr1O70481 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC24.75■■□□□ 1.55
Ubr1O70481 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC24.75■■□□□ 1.55
Ubr1O70481 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ubr1O70481 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ubr1O70481 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr1O70481 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr1O70481 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr1O70481 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr1O70481 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Ubr1O70481 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Ubr1O70481 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr1O70481 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Ubr1O70481 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr1O70481 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr1O70481 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC24.74■■□□□ 1.55
Ubr1O70481 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr1O70481 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC24.74■■□□□ 1.55
Ubr1O70481 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ubr1O70481 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
Ubr1O70481 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ubr1O70481 Gm18666-201ENSMUST00000190039 958 ntBASIC24.73■■□□□ 1.55
Ubr1O70481 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Ubr1O70481 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ubr1O70481 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ubr1O70481 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC24.73■■□□□ 1.55
Ubr1O70481 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ubr1O70481 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ubr1O70481 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr1O70481 Gm8309-201ENSMUST00000206627 1448 ntBASIC24.72■■□□□ 1.55
Ubr1O70481 Nrn1-203ENSMUST00000223611 1443 ntBASIC24.72■■□□□ 1.55
Ubr1O70481 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr1O70481 AC160393.1-201ENSMUST00000218378 1279 ntBASIC24.72■■□□□ 1.55
Ubr1O70481 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr1O70481 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.72■■□□□ 1.55
Ubr1O70481 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr1O70481 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr1O70481 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr1O70481 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC24.72■■□□□ 1.55
Ubr1O70481 Gm37055-201ENSMUST00000191866 133 ntBASIC24.72■■□□□ 1.55
Ubr1O70481 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr1O70481 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ubr1O70481 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC24.72■■□□□ 1.55
Ubr1O70481 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Ubr1O70481 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ubr1O70481 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ubr1O70481 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ubr1O70481 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ubr1O70481 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Ubr1O70481 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Ubr1O70481 Mir1199-201ENSMUST00000117015 119 ntBASIC24.7■■□□□ 1.55
Ubr1O70481 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC24.7■■□□□ 1.55
Ubr1O70481 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ubr1O70481 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ubr1O70481 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ubr1O70481 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ubr1O70481 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ubr1O70481 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Ubr1O70481 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Ubr1O70481 Gm6576-201ENSMUST00000169678 883 ntBASIC24.7■■□□□ 1.54
Ubr1O70481 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ubr1O70481 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ubr1O70481 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ubr1O70481 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Ubr1O70481 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ubr1O70481 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ubr1O70481 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ubr1O70481 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Ubr1O70481 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ubr1O70481 Mir5122-201ENSMUST00000175004 89 ntBASIC24.68■■□□□ 1.54
Ubr1O70481 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC24.68■■□□□ 1.54
Ubr1O70481 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Ubr1O70481 AC126028.2-201ENSMUST00000228100 1833 ntBASIC24.68■■□□□ 1.54
Ubr1O70481 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ubr1O70481 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ubr1O70481 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ubr1O70481 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ubr1O70481 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ubr1O70481 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr1O70481 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC24.67■■□□□ 1.54
Ubr1O70481 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr1O70481 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr1O70481 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr1O70481 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC24.67■■□□□ 1.54
Ubr1O70481 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr1O70481 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr1O70481 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr1O70481 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ubr1O70481 AC158538.1-201ENSMUST00000225870 294 ntBASIC24.66■■□□□ 1.54
Ubr1O70481 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ubr1O70481 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ubr1O70481 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ubr1O70481 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Ubr1O70481 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ubr1O70481 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ubr1O70481 AC175538.1-201ENSMUST00000225343 1269 ntBASIC24.65■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms