Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pdlim1O70400 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim1O70400 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim1O70400 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pdlim1O70400 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim1O70400 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim1O70400 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pdlim1O70400 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim1O70400 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim1O70400 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pdlim1O70400 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim1O70400 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim1O70400 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim1O70400 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.56■□□□□ 0.56
Pdlim1O70400 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.56■□□□□ 0.56
Pdlim1O70400 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.56■□□□□ 0.56
Pdlim1O70400 Gm6420-201ENSMUST00000193885 723 ntBASIC18.56■□□□□ 0.56
Pdlim1O70400 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.56■□□□□ 0.56
Pdlim1O70400 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.56■□□□□ 0.56
Pdlim1O70400 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim1O70400 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim1O70400 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pdlim1O70400 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pdlim1O70400 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pdlim1O70400 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim1O70400 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pdlim1O70400 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim1O70400 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim1O70400 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.54■□□□□ 0.56
Pdlim1O70400 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.54■□□□□ 0.56
Pdlim1O70400 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.54■□□□□ 0.56
Pdlim1O70400 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.54■□□□□ 0.56
Pdlim1O70400 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim1O70400 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.54■□□□□ 0.56
Pdlim1O70400 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Pdlim1O70400 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim1O70400 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim1O70400 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim1O70400 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim1O70400 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim1O70400 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim1O70400 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Pdlim1O70400 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.54■□□□□ 0.56
Pdlim1O70400 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim1O70400 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim1O70400 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.53■□□□□ 0.56
Pdlim1O70400 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim1O70400 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pdlim1O70400 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim1O70400 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pdlim1O70400 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim1O70400 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pdlim1O70400 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.53■□□□□ 0.56
Pdlim1O70400 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim1O70400 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pdlim1O70400 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim1O70400 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim1O70400 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim1O70400 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim1O70400 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim1O70400 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim1O70400 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pdlim1O70400 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim1O70400 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim1O70400 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim1O70400 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim1O70400 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim1O70400 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.52■□□□□ 0.55
Pdlim1O70400 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Pdlim1O70400 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim1O70400 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.51■□□□□ 0.55
Pdlim1O70400 Nespas-201ENSMUST00000143738 1083 ntBASIC18.51■□□□□ 0.55
Pdlim1O70400 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.51■□□□□ 0.55
Pdlim1O70400 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim1O70400 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim1O70400 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim1O70400 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim1O70400 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim1O70400 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim1O70400 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim1O70400 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim1O70400 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim1O70400 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.5■□□□□ 0.55
Pdlim1O70400 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim1O70400 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim1O70400 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim1O70400 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim1O70400 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pdlim1O70400 BC021767-201ENSMUST00000126387 1716 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms