Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SgceO70258 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
SgceO70258 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SgceO70258 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SgceO70258 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.75■□□□□ 0.27
SgceO70258 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SgceO70258 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgceO70258 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgceO70258 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgceO70258 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SgceO70258 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
SgceO70258 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgceO70258 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SgceO70258 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SgceO70258 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgceO70258 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.74■□□□□ 0.27
SgceO70258 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.74■□□□□ 0.27
SgceO70258 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgceO70258 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgceO70258 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgceO70258 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.74■□□□□ 0.27
SgceO70258 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SgceO70258 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SgceO70258 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgceO70258 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SgceO70258 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.73■□□□□ 0.27
SgceO70258 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SgceO70258 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.73■□□□□ 0.27
SgceO70258 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.73■□□□□ 0.27
SgceO70258 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.73■□□□□ 0.27
SgceO70258 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SgceO70258 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.73■□□□□ 0.27
SgceO70258 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgceO70258 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.73■□□□□ 0.27
SgceO70258 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SgceO70258 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.72■□□□□ 0.27
SgceO70258 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SgceO70258 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.72■□□□□ 0.27
SgceO70258 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SgceO70258 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgceO70258 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgceO70258 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SgceO70258 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgceO70258 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SgceO70258 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.71■□□□□ 0.27
SgceO70258 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 Gm7860-201ENSMUST00000121190 879 ntBASIC16.71■□□□□ 0.27
SgceO70258 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.71■□□□□ 0.27
SgceO70258 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.71■□□□□ 0.27
SgceO70258 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SgceO70258 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgceO70258 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgceO70258 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgceO70258 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgceO70258 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgceO70258 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgceO70258 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgceO70258 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SgceO70258 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgceO70258 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgceO70258 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgceO70258 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgceO70258 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SgceO70258 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgceO70258 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.7■□□□□ 0.26
SgceO70258 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms