Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Per1O35973 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Per1O35973 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Per1O35973 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Per1O35973 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Per1O35973 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Per1O35973 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.53■□□□□ 0.88
Per1O35973 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Per1O35973 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.53■□□□□ 0.88
Per1O35973 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Per1O35973 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Per1O35973 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Per1O35973 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Per1O35973 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Per1O35973 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.52■□□□□ 0.88
Per1O35973 Gm26524-201ENSMUST00000192339 390 ntBASIC20.52■□□□□ 0.88
Per1O35973 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Per1O35973 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Per1O35973 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Per1O35973 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Per1O35973 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Per1O35973 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Per1O35973 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Per1O35973 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Per1O35973 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Per1O35973 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Per1O35973 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Per1O35973 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.51■□□□□ 0.87
Per1O35973 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Per1O35973 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Per1O35973 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Per1O35973 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Per1O35973 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Per1O35973 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Per1O35973 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Per1O35973 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Per1O35973 Gm12441-201ENSMUST00000121806 588 ntBASIC20.5■□□□□ 0.87
Per1O35973 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Per1O35973 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.5■□□□□ 0.87
Per1O35973 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Per1O35973 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Per1O35973 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Per1O35973 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Per1O35973 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Per1O35973 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Per1O35973 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Per1O35973 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per1O35973 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Per1O35973 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per1O35973 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per1O35973 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per1O35973 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per1O35973 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Per1O35973 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.49■□□□□ 0.87
Per1O35973 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Per1O35973 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per1O35973 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per1O35973 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per1O35973 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Per1O35973 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.48■□□□□ 0.87
Per1O35973 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Per1O35973 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Per1O35973 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Per1O35973 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.47■□□□□ 0.87
Per1O35973 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.47■□□□□ 0.87
Per1O35973 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.47■□□□□ 0.87
Per1O35973 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.47■□□□□ 0.87
Per1O35973 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Per1O35973 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Per1O35973 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Per1O35973 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Per1O35973 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Per1O35973 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Per1O35973 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Per1O35973 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Per1O35973 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Per1O35973 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Per1O35973 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Per1O35973 Rab3c-203ENSMUST00000224180 967 ntBASIC20.46■□□□□ 0.87
Per1O35973 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Per1O35973 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Per1O35973 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Per1O35973 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Per1O35973 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Per1O35973 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Per1O35973 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Per1O35973 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms