Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
Stx1aO35526 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Stx1aO35526 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.13■□□□□ 0.97
Stx1aO35526 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.13■□□□□ 0.97
Stx1aO35526 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stx1aO35526 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stx1aO35526 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Stx1aO35526 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stx1aO35526 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stx1aO35526 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.13■□□□□ 0.97
Stx1aO35526 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stx1aO35526 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.13■□□□□ 0.97
Stx1aO35526 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.13■□□□□ 0.97
Stx1aO35526 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Stx1aO35526 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Stx1aO35526 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.13■□□□□ 0.97
Stx1aO35526 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stx1aO35526 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stx1aO35526 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stx1aO35526 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stx1aO35526 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.13■□□□□ 0.97
Stx1aO35526 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.12■□□□□ 0.97
Stx1aO35526 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.12■□□□□ 0.97
Stx1aO35526 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.12■□□□□ 0.97
Stx1aO35526 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stx1aO35526 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Stx1aO35526 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stx1aO35526 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.11■□□□□ 0.97
Stx1aO35526 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.11■□□□□ 0.97
Stx1aO35526 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stx1aO35526 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Stx1aO35526 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Stx1aO35526 Gm14117-201ENSMUST00000122417 843 ntBASIC21.11■□□□□ 0.97
Stx1aO35526 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.11■□□□□ 0.97
Stx1aO35526 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stx1aO35526 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stx1aO35526 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Stx1aO35526 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Stx1aO35526 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stx1aO35526 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stx1aO35526 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stx1aO35526 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.11■□□□□ 0.97
Stx1aO35526 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Stx1aO35526 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stx1aO35526 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Stx1aO35526 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stx1aO35526 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.1■□□□□ 0.97
Stx1aO35526 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stx1aO35526 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stx1aO35526 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Stx1aO35526 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stx1aO35526 Gm45102-201ENSMUST00000207427 857 ntBASIC21.1■□□□□ 0.97
Stx1aO35526 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.1■□□□□ 0.97
Stx1aO35526 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stx1aO35526 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Stx1aO35526 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stx1aO35526 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Stx1aO35526 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Stx1aO35526 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stx1aO35526 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stx1aO35526 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stx1aO35526 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Stx1aO35526 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.09■□□□□ 0.97
Stx1aO35526 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.09■□□□□ 0.97
Stx1aO35526 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stx1aO35526 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Stx1aO35526 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.09■□□□□ 0.97
Stx1aO35526 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Stx1aO35526 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stx1aO35526 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Stx1aO35526 Gm12922-201ENSMUST00000120626 809 ntBASIC21.08■□□□□ 0.97
Stx1aO35526 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Stx1aO35526 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Stx1aO35526 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
Stx1aO35526 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stx1aO35526 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Stx1aO35526 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stx1aO35526 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Stx1aO35526 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stx1aO35526 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stx1aO35526 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stx1aO35526 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stx1aO35526 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stx1aO35526 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.06■□□□□ 0.96
Stx1aO35526 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stx1aO35526 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stx1aO35526 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.06■□□□□ 0.96
Stx1aO35526 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms