Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Col15a1O35206 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
Col15a1O35206 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC24.38■■□□□ 1.49
Col15a1O35206 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Col15a1O35206 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Col15a1O35206 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col15a1O35206 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col15a1O35206 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Col15a1O35206 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC24.37■■□□□ 1.49
Col15a1O35206 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col15a1O35206 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Col15a1O35206 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col15a1O35206 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Col15a1O35206 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC24.36■■□□□ 1.49
Col15a1O35206 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Col15a1O35206 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC24.36■■□□□ 1.49
Col15a1O35206 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC24.36■■□□□ 1.49
Col15a1O35206 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC24.36■■□□□ 1.49
Col15a1O35206 Wnt10b-205ENSMUST00000226846 1204 ntBASIC24.36■■□□□ 1.49
Col15a1O35206 AC130671.1-201ENSMUST00000227384 1237 ntBASIC24.36■■□□□ 1.49
Col15a1O35206 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col15a1O35206 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Col15a1O35206 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col15a1O35206 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col15a1O35206 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col15a1O35206 AC160393.1-201ENSMUST00000218378 1279 ntBASIC24.35■■□□□ 1.49
Col15a1O35206 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col15a1O35206 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Col15a1O35206 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Col15a1O35206 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Col15a1O35206 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col15a1O35206 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Col15a1O35206 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Col15a1O35206 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
Col15a1O35206 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col15a1O35206 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col15a1O35206 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Col15a1O35206 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col15a1O35206 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col15a1O35206 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Col15a1O35206 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC24.33■■□□□ 1.49
Col15a1O35206 Gm11927-201ENSMUST00000118472 759 ntBASIC24.33■■□□□ 1.49
Col15a1O35206 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col15a1O35206 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Col15a1O35206 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col15a1O35206 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col15a1O35206 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Col15a1O35206 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col15a1O35206 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col15a1O35206 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC24.32■■□□□ 1.48
Col15a1O35206 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col15a1O35206 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col15a1O35206 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col15a1O35206 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col15a1O35206 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Col15a1O35206 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Col15a1O35206 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Col15a1O35206 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Col15a1O35206 Alkbh1-212ENSMUST00000185301 408 ntBASIC24.31■■□□□ 1.48
Col15a1O35206 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Col15a1O35206 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Col15a1O35206 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Col15a1O35206 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col15a1O35206 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
Col15a1O35206 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Col15a1O35206 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Col15a1O35206 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC24.3■■□□□ 1.48
Col15a1O35206 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Col15a1O35206 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col15a1O35206 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC24.3■■□□□ 1.48
Col15a1O35206 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col15a1O35206 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col15a1O35206 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col15a1O35206 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col15a1O35206 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Col15a1O35206 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Col15a1O35206 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.3■■□□□ 1.48
Col15a1O35206 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Col15a1O35206 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC24.3■■□□□ 1.48
Col15a1O35206 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Col15a1O35206 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col15a1O35206 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col15a1O35206 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col15a1O35206 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Col15a1O35206 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col15a1O35206 Gm43006-201ENSMUST00000197702 1602 ntBASIC24.29■■□□□ 1.48
Col15a1O35206 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC24.29■■□□□ 1.48
Col15a1O35206 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Col15a1O35206 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col15a1O35206 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC24.29■■□□□ 1.48
Col15a1O35206 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col15a1O35206 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col15a1O35206 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col15a1O35206 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col15a1O35206 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col15a1O35206 Mir5122-201ENSMUST00000175004 89 ntBASIC24.28■■□□□ 1.48
Col15a1O35206 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col15a1O35206 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col15a1O35206 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col15a1O35206 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms