Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.24■□□□□ 0.19
Gfra3O35118 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.24■□□□□ 0.19
Gfra3O35118 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.24■□□□□ 0.19
Gfra3O35118 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Gfra3O35118 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.24■□□□□ 0.19
Gfra3O35118 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.24■□□□□ 0.19
Gfra3O35118 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.24■□□□□ 0.19
Gfra3O35118 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gfra3O35118 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Gfra3O35118 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gfra3O35118 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Gfra3O35118 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gfra3O35118 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gfra3O35118 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gfra3O35118 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gfra3O35118 Gm6365-201ENSMUST00000054711 744 ntBASIC16.23■□□□□ 0.19
Gfra3O35118 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Gfra3O35118 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gfra3O35118 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gfra3O35118 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gfra3O35118 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gfra3O35118 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Gfra3O35118 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Gfra3O35118 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gfra3O35118 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gfra3O35118 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gfra3O35118 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gfra3O35118 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gfra3O35118 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.21■□□□□ 0.19
Gfra3O35118 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Gfra3O35118 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gfra3O35118 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gfra3O35118 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.21■□□□□ 0.19
Gfra3O35118 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gfra3O35118 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.21■□□□□ 0.19
Gfra3O35118 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gfra3O35118 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Gfra3O35118 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gfra3O35118 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gfra3O35118 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gfra3O35118 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.2■□□□□ 0.18
Gfra3O35118 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gfra3O35118 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gfra3O35118 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.2■□□□□ 0.18
Gfra3O35118 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gfra3O35118 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gfra3O35118 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gfra3O35118 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gfra3O35118 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.19■□□□□ 0.18
Gfra3O35118 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gfra3O35118 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gfra3O35118 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.19■□□□□ 0.18
Gfra3O35118 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.19■□□□□ 0.18
Gfra3O35118 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.19■□□□□ 0.18
Gfra3O35118 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.19■□□□□ 0.18
Gfra3O35118 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gfra3O35118 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.19■□□□□ 0.18
Gfra3O35118 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gfra3O35118 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gfra3O35118 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gfra3O35118 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gfra3O35118 Gm7290-201ENSMUST00000104990 617 ntBASIC16.18■□□□□ 0.18
Gfra3O35118 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.18■□□□□ 0.18
Gfra3O35118 Gm12918-201ENSMUST00000120234 636 ntBASIC16.18■□□□□ 0.18
Gfra3O35118 Gm15710-201ENSMUST00000121821 636 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms