Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Scarb2O35114 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scarb2O35114 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Scarb2O35114 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.51■□□□□ 0.39
Scarb2O35114 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scarb2O35114 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb2O35114 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.5■□□□□ 0.39
Scarb2O35114 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Scarb2O35114 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Scarb2O35114 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Scarb2O35114 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.5■□□□□ 0.39
Scarb2O35114 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Scarb2O35114 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.5■□□□□ 0.39
Scarb2O35114 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.5■□□□□ 0.39
Scarb2O35114 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Scarb2O35114 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.5■□□□□ 0.39
Scarb2O35114 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb2O35114 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Scarb2O35114 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Scarb2O35114 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb2O35114 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Scarb2O35114 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb2O35114 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.49■□□□□ 0.39
Scarb2O35114 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.49■□□□□ 0.39
Scarb2O35114 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb2O35114 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb2O35114 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb2O35114 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb2O35114 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Scarb2O35114 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb2O35114 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb2O35114 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.48■□□□□ 0.39
Scarb2O35114 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.48■□□□□ 0.39
Scarb2O35114 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scarb2O35114 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.48■□□□□ 0.39
Scarb2O35114 Gm43060-201ENSMUST00000200621 289 ntBASIC17.48■□□□□ 0.39
Scarb2O35114 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scarb2O35114 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Scarb2O35114 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Scarb2O35114 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb2O35114 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb2O35114 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb2O35114 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb2O35114 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
Scarb2O35114 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb2O35114 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb2O35114 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb2O35114 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb2O35114 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb2O35114 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.47■□□□□ 0.39
Scarb2O35114 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb2O35114 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Scarb2O35114 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb2O35114 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb2O35114 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb2O35114 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Scarb2O35114 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Scarb2O35114 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Scarb2O35114 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb2O35114 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms