Protein–RNA interactions for Protein: O35089

Cnih2, Protein cornichon homolog 2, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih2O35089 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cnih2O35089 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.63■□□□□ 0.25
Cnih2O35089 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cnih2O35089 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cnih2O35089 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cnih2O35089 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnih2O35089 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cnih2O35089 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cnih2O35089 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cnih2O35089 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.62■□□□□ 0.25
Cnih2O35089 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.62■□□□□ 0.25
Cnih2O35089 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.62■□□□□ 0.25
Cnih2O35089 Gm5921-201ENSMUST00000075898 882 ntBASIC16.62■□□□□ 0.25
Cnih2O35089 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cnih2O35089 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cnih2O35089 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cnih2O35089 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cnih2O35089 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.61■□□□□ 0.25
Cnih2O35089 Gm10232-201ENSMUST00000089221 720 ntBASIC16.61■□□□□ 0.25
Cnih2O35089 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cnih2O35089 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cnih2O35089 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cnih2O35089 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Cnih2O35089 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cnih2O35089 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cnih2O35089 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnih2O35089 Cap2-205ENSMUST00000225824 1634 ntBASIC16.59■□□□□ 0.25
Cnih2O35089 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cnih2O35089 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnih2O35089 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cnih2O35089 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.59■□□□□ 0.25
Cnih2O35089 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnih2O35089 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cnih2O35089 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
Cnih2O35089 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnih2O35089 Gm43530-201ENSMUST00000195920 274 ntBASIC16.59■□□□□ 0.25
Cnih2O35089 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnih2O35089 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnih2O35089 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cnih2O35089 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.58■□□□□ 0.25
Cnih2O35089 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Cnih2O35089 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cnih2O35089 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cnih2O35089 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cnih2O35089 Fst-202ENSMUST00000223640 2612 ntBASIC16.58■□□□□ 0.25
Cnih2O35089 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnih2O35089 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Cnih2O35089 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cnih2O35089 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnih2O35089 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnih2O35089 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.58■□□□□ 0.24
Cnih2O35089 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnih2O35089 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnih2O35089 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnih2O35089 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnih2O35089 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnih2O35089 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cnih2O35089 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnih2O35089 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnih2O35089 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms