Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Gm10493-201ENSMUST00000097270 612 ntBASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-3J3QMG8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Gm13146-201ENSMUST00000118508 780 ntBASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-3J3QMG8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Gm13234-201ENSMUST00000120010 747 ntBASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13d-3J3QMG8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13d-3J3QMG8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13d-3J3QMG8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms