Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Trim55G3X8Y1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim55G3X8Y1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim55G3X8Y1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim55G3X8Y1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim55G3X8Y1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim55G3X8Y1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim55G3X8Y1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.28■□□□□ 0.68
Trim55G3X8Y1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim55G3X8Y1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Trim55G3X8Y1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trim55G3X8Y1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trim55G3X8Y1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim55G3X8Y1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim55G3X8Y1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim55G3X8Y1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms