Protein–RNA interactions for Protein: E9PUZ9

Pdzrn4, PDZ domain-containing RING finger 4, mousemouse

Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn4E9PUZ9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdzrn4E9PUZ9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdzrn4E9PUZ9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdzrn4E9PUZ9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdzrn4E9PUZ9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdzrn4E9PUZ9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Pdzrn4E9PUZ9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdzrn4E9PUZ9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdzrn4E9PUZ9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdzrn4E9PUZ9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdzrn4E9PUZ9 Gm5643-201ENSMUST00000117081 966 ntBASIC21.19■□□□□ 0.98
Pdzrn4E9PUZ9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdzrn4E9PUZ9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdzrn4E9PUZ9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pdzrn4E9PUZ9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdzrn4E9PUZ9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pdzrn4E9PUZ9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdzrn4E9PUZ9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdzrn4E9PUZ9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.17■□□□□ 0.98
Pdzrn4E9PUZ9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Pdzrn4E9PUZ9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pdzrn4E9PUZ9 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.17■□□□□ 0.98
Pdzrn4E9PUZ9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdzrn4E9PUZ9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdzrn4E9PUZ9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.17■□□□□ 0.98
Pdzrn4E9PUZ9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdzrn4E9PUZ9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 Gm27275-201ENSMUST00000184318 272 ntBASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pdzrn4E9PUZ9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pdzrn4E9PUZ9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdzrn4E9PUZ9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pdzrn4E9PUZ9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.15■□□□□ 0.98
Pdzrn4E9PUZ9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdzrn4E9PUZ9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.15■□□□□ 0.98
Pdzrn4E9PUZ9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pdzrn4E9PUZ9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.15■□□□□ 0.98
Pdzrn4E9PUZ9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdzrn4E9PUZ9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdzrn4E9PUZ9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pdzrn4E9PUZ9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pdzrn4E9PUZ9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Pdzrn4E9PUZ9 Gm37055-201ENSMUST00000191866 133 ntBASIC21.14■□□□□ 0.97
Pdzrn4E9PUZ9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdzrn4E9PUZ9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pdzrn4E9PUZ9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdzrn4E9PUZ9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdzrn4E9PUZ9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdzrn4E9PUZ9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pdzrn4E9PUZ9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pdzrn4E9PUZ9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdzrn4E9PUZ9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdzrn4E9PUZ9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.12■□□□□ 0.97
Pdzrn4E9PUZ9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdzrn4E9PUZ9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Pdzrn4E9PUZ9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdzrn4E9PUZ9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms