Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc78D3Z5T1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccdc78D3Z5T1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc78D3Z5T1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc78D3Z5T1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc78D3Z5T1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc78D3Z5T1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc78D3Z5T1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Gm7290-201ENSMUST00000104990 617 ntBASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Gm12918-201ENSMUST00000120234 636 ntBASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Gm15710-201ENSMUST00000121821 636 ntBASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Gm5075-201ENSMUST00000196916 622 ntBASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc78D3Z5T1 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.08■□□□□ 0.97
Ccdc78D3Z5T1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc78D3Z5T1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc78D3Z5T1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Ccdc78D3Z5T1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.08■□□□□ 0.97
Ccdc78D3Z5T1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc78D3Z5T1 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.08■□□□□ 0.97
Ccdc78D3Z5T1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc78D3Z5T1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc78D3Z5T1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
Ccdc78D3Z5T1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 Gm6211-202ENSMUST00000167849 925 ntBASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc78D3Z5T1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc78D3Z5T1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc78D3Z5T1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Gm5408-201ENSMUST00000197998 747 ntBASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.04■□□□□ 0.96
Ccdc78D3Z5T1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.03■□□□□ 0.96
Ccdc78D3Z5T1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc78D3Z5T1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc78D3Z5T1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ccdc78D3Z5T1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc78D3Z5T1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms